| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4066 |
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| Symbol | |
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| ID | 4024583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4518364 |
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| End bp | 4519266 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637964269 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_571186 |
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| Protein GI | 91978527 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.556479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.615548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGA TCGTCAACCA GAAAGCCTGG TTCCTGGTGC TGCCGGTGTT CGCCATCGTC
GCGTTCTCGG CGATCCTGCC GTTGATGACG GTCGTGAACT ATTCGATGCA GGACACTTTC
GGCAACAACC AGTTCTTCTG GAACGGGGTC GGCTGGTTCA AGGAATTGCT CGATCCCTCG
ACCGATCTCG GCGGCCGGTT CTTCGCCTCG CTGTGGCGCA ATCTGGCGTT CTCGGCGATC
ATCCTGGCGA TCGAGGTGCC GCTCGGCATC GTGGTCGCGT TGGCGATGCC GCGCCACGGC
TGGTCGGTCG CCGCCTGTCT GGTGATCATG GCGCTTCCGC TGCTGATCCC GTGGAACGTG
GTCGGCACGA TCTGGCAGAT CTTCGGCCGG CCCGACATCG GCCTGCTCGG CTACACGCTG
AACAGCCTCG GCATCAATTA CAACTACGTC TCCAACGAAT TCGACGCCTG GGCGACGGTC
GTGGTGATGG ACGTCTGGCA CTGGACCAGC CTGGTGGCGC TGTTGTGTTA CGCCGGCCTG
AAATCGATCC CGGATGCCTA TTATCAGGCG GCGCAGATCG ACGGCGCGTC GCGCTGGGCG
GTGTTCAAGG CGATCCAGCT GCCGAAGATG CACCGGGTTC TGCTGATCGC GGTGCTGCTG
CGCTTCATGG ACAGCTTCAT GATCTACACC GAGCCGTTCG TCGTCACCGG CGGCGGGCCC
GGCAATTCGA CCACCTTCAT CTCGATCGAA CTCGTCAAGA TCGCGCTCGG CCAGTTCGAT
CTCGGCAAGG CCGCGGCGCT GTCGATCGTC TACAACCTGA TCATCATCAT CGTGTGCTGG
GTGTTCTACA CGGTGATGAC CAACGCCGGC GCCGAGCGCC AGCAGACCCC CGGGAGCGCC
TGA
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| Protein sequence | MEKIVNQKAW FLVLPVFAIV AFSAILPLMT VVNYSMQDTF GNNQFFWNGV GWFKELLDPS
TDLGGRFFAS LWRNLAFSAI ILAIEVPLGI VVALAMPRHG WSVAACLVIM ALPLLIPWNV
VGTIWQIFGR PDIGLLGYTL NSLGINYNYV SNEFDAWATV VVMDVWHWTS LVALLCYAGL
KSIPDAYYQA AQIDGASRWA VFKAIQLPKM HRVLLIAVLL RFMDSFMIYT EPFVVTGGGP
GNSTTFISIE LVKIALGQFD LGKAAALSIV YNLIIIIVCW VFYTVMTNAG AERQQTPGSA
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