| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4055 |
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| Symbol | |
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| ID | 4024572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4506597 |
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| End bp | 4507985 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964258 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_571175 |
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| Protein GI | 91978516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.280069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCG TGGAGAATGC GATGCTGCGG CTCACAGCGA CGGCGCGACA CTTGCGGAGA
TCTTTCGGCG CAGTCGCCGC GGTGGCAACG ATCGCATCGG CCGCATTACT CTCCGCCTCT
CCCGCCCTCG CCCAGCGCGG CGCATCGTGT CACGGCGGGC AGAGCTTCGA TCAGTTTCTT
GCCGGGCTGA AGCAGCAGGC GGTTGCCGCC GGGGTGTCGC AGCGGGCCCT GAGCGCGGCG
GGGCCGTATC TGGTTTACGA TCAGGGCATC GTCAATCGCG ACCGCGGCCA GCGGGTGTTC
GGGCAGATCT TCACGGTATT CGCCGGGCGG ATGGCGTCGG AGGGCCGGCG CGTCAAGGGC
CAGCAGATGA TCAGGCAGCA CGCGCAGGCG TTCGCCCGCG CCGAGAAGGA CTACGGCGTG
CCGCCGGCGG TGATCGCGGC GTTCTGGGCG CTGGAAAGCG ATTTTGGCGC GGTGCAGGGC
AACCTCTCGA CGCTGCGCTC GCTGGTGTCG CTGGCCTATG ATTGCCGCCG CTCCGAGATG
TTTCAGCAGG AGACCATCGC GGCGCTGAAG ATCGTCGACC GCGGCGATCT GGCGCCGGCC
GAGATGATCG GCTCCTGGGC CGGCGAGCTC GGCCAGACGC AATTCCTGCC GCGGCATTAT
TACGACTACG CGGTCGACTA TGACGGCGAC GGCCACCGCG ACATGCTGCG CAGCCCCGCC
GACGTCATCG GCTCGACGGC ACACTACATC GCGACCGGGC TGAAATGGCG GCGCGGCGAG
CCCTGGCTGC AGGAAGTGGC GGTGCCGGCC AATCTTCCCT GGGATCAGGC CGACCTTCTG
GTCAAGCATC CGCGTTCGCA ATGGGCGCAA TGGGGCGTGA CCTCGGCCGA CGGACGGCCG
CTGCAAAGCG ACGCGCTGCC GGCGTCGCTG CTGCTGCCTA TGGGCCGCTC CGGCCCGGCG
TTTCTCGCTT ACGCGAATTT CGCCGCCTAT ACCGAATGGA ACAACTCGCT GATCTATTCG
ACCACCGCGG CCTATCTCGC CACCCGCATC GCCGGCGCAG CGCCGATGCG CAAGCCCAAT
GCGCAGGTGG CGCAATTGCA ATTCAACGAG ATGAAGCAAT TGCAACAGCT GCTGGTGCGG
GCCGGCTTCG ACGTCGGCAA GATCGACGGC GTGCTCGGCC AGCAAACCCG CACCGGCGTC
AAGGCGATGC AGATCAAATA CGGCCTGCCG GCGGATTCCT GGCCGACCGC AGAACTACTC
ACAAGGATGG GCGGCATGGC CACGCCCGCA CCCTCCGCAT CGGCCGAACC ACCGTTCCGT
CCGGCGCAAA GGCCCGGCAT TGCGCCAGCC GAACGACGTC GCAATCCACC ATCGCAACCG
TCGCAATAG
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| Protein sequence | MTFVENAMLR LTATARHLRR SFGAVAAVAT IASAALLSAS PALAQRGASC HGGQSFDQFL
AGLKQQAVAA GVSQRALSAA GPYLVYDQGI VNRDRGQRVF GQIFTVFAGR MASEGRRVKG
QQMIRQHAQA FARAEKDYGV PPAVIAAFWA LESDFGAVQG NLSTLRSLVS LAYDCRRSEM
FQQETIAALK IVDRGDLAPA EMIGSWAGEL GQTQFLPRHY YDYAVDYDGD GHRDMLRSPA
DVIGSTAHYI ATGLKWRRGE PWLQEVAVPA NLPWDQADLL VKHPRSQWAQ WGVTSADGRP
LQSDALPASL LLPMGRSGPA FLAYANFAAY TEWNNSLIYS TTAAYLATRI AGAAPMRKPN
AQVAQLQFNE MKQLQQLLVR AGFDVGKIDG VLGQQTRTGV KAMQIKYGLP ADSWPTAELL
TRMGGMATPA PSASAEPPFR PAQRPGIAPA ERRRNPPSQP SQ
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