Gene RPD_3973 details

Gene Information

• Locus tag: RPD_3973
• Symbol: dnaG
• ID: 4024490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: -
• Start bp: 4422346
• End bp: 4424403
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637964176
• Product: DNA primase
• Protein accession: YP_571093
• Protein GI: 91978434
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTTCA CGCCGCAATT CCTCGACGAG TTGAAAGCCC GGCTTCTGGT GTCGGACGTG 
GTCGGCCGTC GTGTGAAGCT GAAGAAGGCC GGGCGGGAGT GGAAGGGGCT GTCGCCGTTC 
CAGCAGGAGA AGACTCCGTC GTTCTTCGTC AATGACGAGA AGCAGGCGTG GTTCGACTTC 
TCCTCCGGCA AGAACGGCTC GATCTTCGAC TTCATCATGC AGACCGACGG GGTGGATTTC 
CCCGAAGCGG TCGAGCGGCT CGCGGCGATG GCCGGCCTTG CGCTGCCGGC CGCGACGCCC 
GACGCCGCGC GCCAGGAGCA GCGCCGCCGC TCGCTGTACG ATGTGATGGA GCTGGCGGCG 
GCCTACTTCG CCGACAATCT CGCCTCGCGC GCCGGGGCCC GCGCCCGCGG CTATCTCGCA 
GATCGCGGCA TCCTGCCGTC GACCCAGGTC AAGTTCCGGA TCGGCTTCGC AGCGAACGAG 
CGCTACGCGC TGAAGGAGCA TCTCGGCAGT CACGGCGTGC CGGTCGGCGA CATGATCGAG 
GCCGGGCTGC TGTCGGCGGG CGACGATATC CCGGTGCCGT TCGACAAGTT TCGCGACCGG 
GTGATGTTTC CGATCACCGA CATCCGCGGC CGGGTGATCG CCTTCGGCGG CCGGGCGCTG 
GAGAAGGACG TTGCGGCGAA GTATCTGAAC TCGCCGGAAA CGCCGCTGTT TCACAAGGGC 
GACAACCTCT ACAACCTCGC CACGGCCCGC AAGGCGGCGC ATGACGCGGC CGGCAAGTCG 
ACGCCGAACA GCGCCGCGGC GGTGATCGTG GTCGAAGGCT ACATCGACGT CATCGCCATG 
GTCACCGCGG GGTTTGCCGC GACCGTCGCG CCGCTCGGCA CCGCGCTGAC CGAGAACCAG 
CTTCAACTGC TGTGGAAGAT GGCCGACGAG CCGATCCTGT GTTTCGACGG CGACCGCGCC 
GGCCAGAAGG CGGCGTTTCG CGCCGCCGAT CTGGCGCTGC CGCATCTGAA GCCCGGCAAG 
AGCCTGCGTT TCGCGCTGCT GCCCGAGGGC CAGGACCCCG ACGATCTCGC CCGCGCCGGC 
GGTCGCCTCG CGATCGAGGA GGTGATCGGC GCGGCGCGGC CGCTCGCCGA TCTGCTGTGG 
TCGCGCGAGG CCGAGGGCGG CAGTTTCGCC ACGCCGGAGC GCCGGGCGGC GCTGGAGGCG 
CGGATCAACG AGCTTTCGGG CAGCATCCGC GACGAGGTGG TGCGGCGCTA TTATCGCCAG 
GACTGGGCCG AGCGGCTGCG CGCGGCGTTC GCGCCGCAAG GCGGTTTCGG AGGAGGCTTT 
GGCGGCGGGT TCGGTGGCGG CTTCCGCGGC GGGGCTGGGC GCGGCGGTGA TTCGCGGCGC 
GGATTTCCGC CGCGCGGGGG TTTTCCACAG GGGGGCGGCC GTTTTGCGCC GCGCGGCCAG 
CCGTCCGGCC TCAGCTCTCC ACCGTTCGGC CGGGGCGCGT ATCAGGTCGC CAGCCCTGAC 
CTCGCATCCA GTCCGATCAT GCGCGGCCAG CGCAGCGCGA TGTCCCGCCG CGAGGCGCTG 
ATCCTGCAAT CGCTGCTGCA CCACCCCTGG CTGCTGCACG ACCACCTCGA GGAGATAGCG 
GCGCTGGAAT TCGCCCATCC GGAGGCGCAC CGGCTGCGGG CCGCGATCAT CGCCGCCTTC 
GCCCAGGACC ATCATCACGG CGACGATCCG GCGGGGCACG CCGAAAAGCT TCGCGCCGAT 
TTGGTTAAGG CTGGATTATC CGAGCAATTG CAACGCGTTG AGCGCGCGAT CACGACCTCC 
GCGGTGTGGG GGGCGGGTTC CGGCGCCGCC CGCGAGGATG TACTTTCGAC GTGGCAGCAA 
CTGGTTGCCT TGCATCGACA ATCGCACTCC TTACTTAGGG AATTGAAGGA CGCCGAGCTG 
GCCCTGGGCG AAGATGGCAG CGAGGCCAAC AATGCGTGGT TGAACGACGT CAAGGCGCGG 
CTCTCGGAAG TGGAAGGCAC TGAGGCGCTG ATCGAGGGAT TCGGCGAATC ATCCGGCCGG 
TTCCATCGGA GCGTTTGA 

 

Protein sequence

MRFTPQFLDE LKARLLVSDV VGRRVKLKKA GREWKGLSPF QQEKTPSFFV NDEKQAWFDF 
SSGKNGSIFD FIMQTDGVDF PEAVERLAAM AGLALPAATP DAARQEQRRR SLYDVMELAA 
AYFADNLASR AGARARGYLA DRGILPSTQV KFRIGFAANE RYALKEHLGS HGVPVGDMIE 
AGLLSAGDDI PVPFDKFRDR VMFPITDIRG RVIAFGGRAL EKDVAAKYLN SPETPLFHKG 
DNLYNLATAR KAAHDAAGKS TPNSAAAVIV VEGYIDVIAM VTAGFAATVA PLGTALTENQ 
LQLLWKMADE PILCFDGDRA GQKAAFRAAD LALPHLKPGK SLRFALLPEG QDPDDLARAG 
GRLAIEEVIG AARPLADLLW SREAEGGSFA TPERRAALEA RINELSGSIR DEVVRRYYRQ 
DWAERLRAAF APQGGFGGGF GGGFGGGFRG GAGRGGDSRR GFPPRGGFPQ GGGRFAPRGQ 
PSGLSSPPFG RGAYQVASPD LASSPIMRGQ RSAMSRREAL ILQSLLHHPW LLHDHLEEIA 
ALEFAHPEAH RLRAAIIAAF AQDHHHGDDP AGHAEKLRAD LVKAGLSEQL QRVERAITTS 
AVWGAGSGAA REDVLSTWQQ LVALHRQSHS LLRELKDAEL ALGEDGSEAN NAWLNDVKAR 
LSEVEGTEAL IEGFGESSGR FHRSV