| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3883 |
|---|
| Symbol | |
|---|
| ID | 4024399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4321953 |
|---|
| End bp | 4323341 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964087 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_571005 |
|---|
| Protein GI | 91978346 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC TCGACAATGG TCTGACGCTG ATCCGCTCCG CATCGCGGCG GGTGTCGGCG
GCCAATGGAT GGCTGGGGCA GCGCTTCAAC GACTTCATGC CGAAGGGGCT CTACGCCCGC
GCGTTGCTGA TCATGATCGT GCCGATGGTG GTGCTGCAAT CGGTGATCGC CTTCGTGTTC
ATGGAGCGGC ACTGGAACAC GGTGACGCAG CGGCTGTCGG CGGCGGTGGT GCAGGACATT
GCGGCGCTGA TCGACGTCTA TAAGAGCTAC CCCCAGGACA AGGATAGCGC GGCGCTGCGC
CGGATCGCGC AGAACCGGCT CGGGCTGGTG GTCGACTTTC TCGGCCCGAA TGAAATGCCG
CCGCCCGGGC CGAAGCCGTT CTTCTCGCTG CTCGACCAGT CGATCTCGAA ACAGATCGGC
CGCCAGATCG CGCGGCCGTT CTGGATCGAC TCCGTCGGTC GCTCCAATCT CGTCGAAATC
CGCATCCAGC TCGACGACGC GGTGATGCGG GTATTTGCGC TGCGCAGCGC CGCCTACGCC
TCGAATTCGG AGATCTTCCT GGTGTGGATG GTCGGCACCT CGACCGTGCT GCTGATCGTG
GCGGTGCTGT TTCTGCGCAA CCAAATCCGG CCGGTCCTGC GGCTCGCCGA CGCCGCCGAG
AGCTTCGGCA AGGGCCGCGA CGCGCCGAAC TTCAAGCCGC GCGGGGCGCG AGAGGTGCGG
CGCGCGGCCT ACGCCTTCAT CGAGATGAAG AGCCGGGTCG AGCGCGCGAT GGAGCAGCGT
ACCGCGATGC TGGCCGGCGT CAGCCACGAT CTGCGCACCA TTCTGACCCG GTTCAAGCTC
GAGCTCGAAC TGATCGGCGA CGCGCCGGAG ACGGAGGGGA TGCGCAAGGA CGTCGACGAA
ATGTCTGCGA TGCTCGAGGC ATATCTGGCG TTCGCGCGCG GCGACAGCGG CGAGCGGGCG
CAGCCGACCG ACATGCCGGC GGCGCTAGAG GAGTTGCGCA GCGACGCCGA GCGCCACGGC
CACGCCGCCA CTGTGGCTTT CAGCGGTCAG CCGGTTGTGA CGGTGAAACC GGCGTCGTTC
AAACGCTGCC TCGCCAATCT GGTGTCGAAT GCCGCGCGCC ACGCCGACGC CATCGCCATC
ACAGGACAGC GCGATCACCG TTATCTCACG GTGATGATTG ACGACGACGG CCCCGGCATT
CCGACGGCGA TGCGCGAGGA AGTGTTCAAG CCGTTTCTCC GGCTCGACGA CGCCCGCAAC
CAGGACGAAG GCGGCAGTGG CCTCGGCCTC GCCATCGCCC GCGACATCGC GCGCTCGCAT
GGCGGCGACA TCACGCTGGG CGACAGCCCG ATGGGCGGCC TGCGCGCGAC GGTGCGGGTG
CCGGTGTAG
|
|---|
| Protein sequence | MSTLDNGLTL IRSASRRVSA ANGWLGQRFN DFMPKGLYAR ALLIMIVPMV VLQSVIAFVF
MERHWNTVTQ RLSAAVVQDI AALIDVYKSY PQDKDSAALR RIAQNRLGLV VDFLGPNEMP
PPGPKPFFSL LDQSISKQIG RQIARPFWID SVGRSNLVEI RIQLDDAVMR VFALRSAAYA
SNSEIFLVWM VGTSTVLLIV AVLFLRNQIR PVLRLADAAE SFGKGRDAPN FKPRGAREVR
RAAYAFIEMK SRVERAMEQR TAMLAGVSHD LRTILTRFKL ELELIGDAPE TEGMRKDVDE
MSAMLEAYLA FARGDSGERA QPTDMPAALE ELRSDAERHG HAATVAFSGQ PVVTVKPASF
KRCLANLVSN AARHADAIAI TGQRDHRYLT VMIDDDGPGI PTAMREEVFK PFLRLDDARN
QDEGGSGLGL AIARDIARSH GGDITLGDSP MGGLRATVRV PV
|
|---|
| |