Gene RPD_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3873 
Symbol 
ID4024389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4313354 
End bp4313632 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content64% 
IMG OID637964077 
Producthypothetical protein 
Protein accessionYP_570995 
Protein GI91978336 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0389052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA CCAACAACCG GATTTTCGAC GAGATCGGAC GTCTGATGAA CGACGCCGCC 
GGCGCGGCGC AGGGCGTCAA GCGCGAGGTC GACTCGGTGG TGCGCAGCCA GGCCGAAAAG
ATCCTGCGCG ACCTCGACAT CGTCAAGCGC GAGGAATTTG AGGCGTTCAA GGACATGGTC
CGGCTCGCCC GCGAGGAAAA CGAGGCGCTC AAGGCGCGGA TCGCAGCACT CGAAGCCAAG
CTCGGCCCGA CATCGGAGAA TCCGACGTCG GTGGCCTGA
 
Protein sequence
MTQTNNRIFD EIGRLMNDAA GAAQGVKREV DSVVRSQAEK ILRDLDIVKR EEFEAFKDMV 
RLAREENEAL KARIAALEAK LGPTSENPTS VA