Gene RPD_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3870 
Symbol 
ID4024386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4309565 
End bp4310146 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID637964074 
Producthypothetical protein 
Protein accessionYP_570992 
Protein GI91978333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.679069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC AGATCGAGAA GACAGGGAAT GGAGCCGATG CAACGCGGTC GCAGCCGCTG 
AAGTCGGTGA AGAACGAAGC GCAAAACATC GCGGATCAGG CGGCCGCCGC GGGCCGAGAT
ATCAAGGACC GCGTGGTCGG CCTCGCCGAA GACTCGGTCG ACGCCGCGCG CGCTCAGGCC
GAAAATCTCG CCGGCGCCGC CAGGGAGTTC GCGTCCGAAG CCGGCGAGAC GATCAAGGAG
CGCGCCAATT CGCAGCGCGA AGCCGGAGCC GACTATATCG GCGGCATCGC CGATGCAATC
CGCCGCGCGT CGCGCGAATT CGACAACGAT ATGCCGATCG CCGGCGTCTA CATGCGCAAG
GCGGCGGCCA AGGTCGAGGG TATCTCCGAC ACCGTGCAGC GCGGCGATAT TTCGGAGCTG
GTGAAGGGCG TGCAGGATTT CGCCCGCCGC CAACCGACCG CATTCCTCGG CCTCGCCGTG
CTCGCGGGCT TCGGTGCTGT CCGGTTCCTG AAGAGCTCGT CGTCCGCCGG CGATCAGTCA
TATCGCGCGG CGTCGCGGGA CGATCGCGAC GATCGGAGCT GA
 
Protein sequence
MAEQIEKTGN GADATRSQPL KSVKNEAQNI ADQAAAAGRD IKDRVVGLAE DSVDAARAQA 
ENLAGAAREF ASEAGETIKE RANSQREAGA DYIGGIADAI RRASREFDND MPIAGVYMRK
AAAKVEGISD TVQRGDISEL VKGVQDFARR QPTAFLGLAV LAGFGAVRFL KSSSSAGDQS
YRAASRDDRD DRS