Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3870 |
Symbol | |
ID | 4024386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4309565 |
End bp | 4310146 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964074 |
Product | hypothetical protein |
Protein accession | YP_570992 |
Protein GI | 91978333 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.679069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC AGATCGAGAA GACAGGGAAT GGAGCCGATG CAACGCGGTC GCAGCCGCTG AAGTCGGTGA AGAACGAAGC GCAAAACATC GCGGATCAGG CGGCCGCCGC GGGCCGAGAT ATCAAGGACC GCGTGGTCGG CCTCGCCGAA GACTCGGTCG ACGCCGCGCG CGCTCAGGCC GAAAATCTCG CCGGCGCCGC CAGGGAGTTC GCGTCCGAAG CCGGCGAGAC GATCAAGGAG CGCGCCAATT CGCAGCGCGA AGCCGGAGCC GACTATATCG GCGGCATCGC CGATGCAATC CGCCGCGCGT CGCGCGAATT CGACAACGAT ATGCCGATCG CCGGCGTCTA CATGCGCAAG GCGGCGGCCA AGGTCGAGGG TATCTCCGAC ACCGTGCAGC GCGGCGATAT TTCGGAGCTG GTGAAGGGCG TGCAGGATTT CGCCCGCCGC CAACCGACCG CATTCCTCGG CCTCGCCGTG CTCGCGGGCT TCGGTGCTGT CCGGTTCCTG AAGAGCTCGT CGTCCGCCGG CGATCAGTCA TATCGCGCGG CGTCGCGGGA CGATCGCGAC GATCGGAGCT GA
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Protein sequence | MAEQIEKTGN GADATRSQPL KSVKNEAQNI ADQAAAAGRD IKDRVVGLAE DSVDAARAQA ENLAGAAREF ASEAGETIKE RANSQREAGA DYIGGIADAI RRASREFDND MPIAGVYMRK AAAKVEGISD TVQRGDISEL VKGVQDFARR QPTAFLGLAV LAGFGAVRFL KSSSSAGDQS YRAASRDDRD DRS
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