Gene RPD_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3869 
Symbol 
ID4024385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4309168 
End bp4309560 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID637964073 
Producthypothetical protein 
Protein accessionYP_570991 
Protein GI91978332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.748627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CCAGTAATCG CTCGATTCCG GAGCTGTTCG GCGACGCGTT CAACCAATTC 
GCCAAGCTGA TCAGCAACGA GTTCGATCTC GCCCGCGCCG AAATGGCCGA CAAGGTCGGT
CAGGCCGGAC GCGCGGCGGC GATGATGGGC GCGGGGGCGG TGATCCTGAT CCCAGGGCTT
GTGATGTTGC TGTTCGCGCT CTCAGCCGTG CTGATCGAGA ACGGGTTCTC GCAATCGATC
GCCTATCTGA TCACCGGGGG CGGCACGGTG GTGGTCGCGG CTGCGTTGAT CGGCATTGGT
CTCAGCCGAC TGTCCCCCGA GGCGCTCACG CCGAACATCA CGATCGAGCA ATTGCAGCGC
GACAAGGTCG CGGCAAAGGA GATGGTCAAG TGA
 
Protein sequence
MTTPSNRSIP ELFGDAFNQF AKLISNEFDL ARAEMADKVG QAGRAAAMMG AGAVILIPGL 
VMLLFALSAV LIENGFSQSI AYLITGGGTV VVAAALIGIG LSRLSPEALT PNITIEQLQR
DKVAAKEMVK