Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3868 |
Symbol | |
ID | 4024384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4308443 |
End bp | 4309141 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637964072 |
Product | hypothetical protein |
Protein accession | YP_570990 |
Protein GI | 91978331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.407065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTA TCAACGATCT CGGCGATGCG ATGCGGCGCA ATCCGGTCTC GACCGCGCTG ATCGGCATGG GCGTCTTGTG GCTGTTCACC GGCGGCAGAG TCAGGGAAGG CGCGTCAAAG TTGGCCAACA GCGACTCGTT CGATCGCGTG AGCGATGTGG CGTCCGACGT CATCGGCGCC GGGCGGGCTG CGATGCACGA CGTCAGCGAA CGGGTCAGTG ACCGTTTCGC CGACGTCAGC GATCGTGTCG GCCACGCGGT GCATGCCGTG CGTGACACCG GTGCGGCAGC GCTCGACCAA GCGAGCGATC TGGGTCGCCA GATTCCGGAC ACTGGGACCG AGTTGCTCGG CGCGGCGCGG TCGCGTCTGA CCGATCTGTT CAACGAGCAG CCGCTGATGC TCGGCGCGCT CGGCGTCGCG ATCGGCGCTG GAATTGCGGC CTCGCTGCCG TCGACGAGTG TGGAAGCCGA GTTGTTCGGC GAAAGCAGCG ACGAGTTCAA GGCGCAGGCC CGCGGCTTCG TGGATCGCGC CAGCGAGCGC GCCGGCGCGG TCGCGCGCGA TGCCGTCAGC GCCGCGACCG AGGAAGCACG GCGCCAGGGG TTGACGCCCG ATGGTGTGAT GGCCGCGGTC AGTGATGTCG GCGACAAGGT CAAGCGTGCG GCCGATGTCG CCGCCGAAGA CAACCTCCGA CTGGAGTGA
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Protein sequence | MPFINDLGDA MRRNPVSTAL IGMGVLWLFT GGRVREGASK LANSDSFDRV SDVASDVIGA GRAAMHDVSE RVSDRFADVS DRVGHAVHAV RDTGAAALDQ ASDLGRQIPD TGTELLGAAR SRLTDLFNEQ PLMLGALGVA IGAGIAASLP STSVEAELFG ESSDEFKAQA RGFVDRASER AGAVARDAVS AATEEARRQG LTPDGVMAAV SDVGDKVKRA ADVAAEDNLR LE
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