Gene RPD_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3868 
Symbol 
ID4024384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4308443 
End bp4309141 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID637964072 
Producthypothetical protein 
Protein accessionYP_570990 
Protein GI91978331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.407065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTA TCAACGATCT CGGCGATGCG ATGCGGCGCA ATCCGGTCTC GACCGCGCTG 
ATCGGCATGG GCGTCTTGTG GCTGTTCACC GGCGGCAGAG TCAGGGAAGG CGCGTCAAAG
TTGGCCAACA GCGACTCGTT CGATCGCGTG AGCGATGTGG CGTCCGACGT CATCGGCGCC
GGGCGGGCTG CGATGCACGA CGTCAGCGAA CGGGTCAGTG ACCGTTTCGC CGACGTCAGC
GATCGTGTCG GCCACGCGGT GCATGCCGTG CGTGACACCG GTGCGGCAGC GCTCGACCAA
GCGAGCGATC TGGGTCGCCA GATTCCGGAC ACTGGGACCG AGTTGCTCGG CGCGGCGCGG
TCGCGTCTGA CCGATCTGTT CAACGAGCAG CCGCTGATGC TCGGCGCGCT CGGCGTCGCG
ATCGGCGCTG GAATTGCGGC CTCGCTGCCG TCGACGAGTG TGGAAGCCGA GTTGTTCGGC
GAAAGCAGCG ACGAGTTCAA GGCGCAGGCC CGCGGCTTCG TGGATCGCGC CAGCGAGCGC
GCCGGCGCGG TCGCGCGCGA TGCCGTCAGC GCCGCGACCG AGGAAGCACG GCGCCAGGGG
TTGACGCCCG ATGGTGTGAT GGCCGCGGTC AGTGATGTCG GCGACAAGGT CAAGCGTGCG
GCCGATGTCG CCGCCGAAGA CAACCTCCGA CTGGAGTGA
 
Protein sequence
MPFINDLGDA MRRNPVSTAL IGMGVLWLFT GGRVREGASK LANSDSFDRV SDVASDVIGA 
GRAAMHDVSE RVSDRFADVS DRVGHAVHAV RDTGAAALDQ ASDLGRQIPD TGTELLGAAR
SRLTDLFNEQ PLMLGALGVA IGAGIAASLP STSVEAELFG ESSDEFKAQA RGFVDRASER
AGAVARDAVS AATEEARRQG LTPDGVMAAV SDVGDKVKRA ADVAAEDNLR LE