Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3774 |
Symbol | |
ID | 4024290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4212682 |
End bp | 4214283 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637963978 |
Product | hypothetical protein |
Protein accession | YP_570896 |
Protein GI | 91978237 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0113955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0693003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAG CCCGGGTGAA GCCGCTCCGC CTCGTCGTTG CCTTCGCCGC GGTGATCGCG ATCGCGGTCG CGCTGTGGCA ATTGCAGCGC GCCACCGACG ATCTGATCAT CACGCATACG AGCGTCGGCG AGACCCCGGT CACAGTGTTC CGGCCGCCCT CGACCGCGCC GGCGCCAGTG GTCGTGATCG CGCACGGCTT CGCCGGTTCG CAGCAATTGA TGCAGCCCTT CGCCCAGACC CTGGCGCGCA ACGGCTATAT CGCGGTCACG TTCGACTGCA CCGGCCATGG CCGCAACCCG GTGACGATGG TGGGCGACGT CGACGAGCCG ACCAAAATCA CCGGCGTCTT GGTGGATGAG CTCGGCCGAG TCACCGACTA CGCCCGGGCA TTGCCGCAGA GCGACGGCCG CGCCGCCGTG CTCGGCCATT CGATGGCGTC CGACATCGTG GTGCGCTACG GCGTGACGCA TCCGGAGATC ACCGCCACCG TCGCGGTGTC GGTGTTCAGC AAAGTCGCGA CCGCGACCGG CCCGCGCAAT CTGTTGGTGA TCGTCGGCGC GGTCGAGCCA CAGATGCTGA TCGACGAAGG CCTGCGCATC GTCAATCTCG CGACCGGTGG CGGCGCAGCG GCTGGCCGAA CCTATGGCGA TTTCAGCGCG GGCACCGCGC GGCGGCTGGC GCTGTCGTCC GGCGTCGAAC ATATCGGCGT GCTGTACAGC CAGGACAGCA TGCGTGAAAC GCTGCAATGG ATGAACGAGT CGTTCGGCCG GCAAGGCGCG GGCTGGATCG ATCGTCGCCC GATGTGGCTG GCGCTGTTGT TTGGGGGCCT GATCGCGCTG GCGTGGCCGC TGTCGAAGCT GCTGCCGCAG GCAGCACCTG TGCCGATGGG CGCAAGCCTG ACCTGGAAGC CGCTGCTGAT CGCCGCAATT CTACCCGCGG TGCTGACGCC GCTGATACTG TGGAAGGCGC CGACCGACTT CCTGATCATC CTGCTCGGCG ACTATCTCAC GCTGCATTTC CTGCTGTACG GCGCACTCAC CGCCGCGATC CTGCTGCTGA TCCGCGCGCG CGGCCGCAAG GCGCACGCTT ACGCCGCCAA GCATCCCACA CACGGGCTGG AGAAGCTGGA GTCGCTGCCC GATCCAGTCC ATCCGCGGAT CTCGATCGCC GCATTGGCGA TCGCGTCGGT GGCGGCGATC GCCTACAACA TCATCGGCTT CGGTCTGCCG CTCGACAGCT ATGTGTTCTC CTTCATGCCG ATCGAGCCGC GGTTGTATCT GATCGCCGCG ATCGCCTGCG GCACCATTCC ATATTTCATC ACCGCGGAAT GGATGGCGCA TGGCGCGGGC GCCAAGCGCG GCGCCTATGC GCTGGCGAAG TTCTGCTTCC TCGCCTCGCT CGCGTTCGCC GTTGCGCTCA ATCTGCAGAA GCTGTTCTTT CTGATCATCA TCGTGCCGGC GATCCTGCTG TTGTTCATCG CCTTCGGGGT GATCAGCAAC TGGACCTACA AGGCCACCAA TCATCCTTTG CCCGGCGCTC TGGCCAATGC CATCCTGTTC GCCTGGGCGA TCGCGGTGAC GTTCCCGATG GTGATCCGCT GA
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Protein sequence | MARARVKPLR LVVAFAAVIA IAVALWQLQR ATDDLIITHT SVGETPVTVF RPPSTAPAPV VVIAHGFAGS QQLMQPFAQT LARNGYIAVT FDCTGHGRNP VTMVGDVDEP TKITGVLVDE LGRVTDYARA LPQSDGRAAV LGHSMASDIV VRYGVTHPEI TATVAVSVFS KVATATGPRN LLVIVGAVEP QMLIDEGLRI VNLATGGGAA AGRTYGDFSA GTARRLALSS GVEHIGVLYS QDSMRETLQW MNESFGRQGA GWIDRRPMWL ALLFGGLIAL AWPLSKLLPQ AAPVPMGASL TWKPLLIAAI LPAVLTPLIL WKAPTDFLII LLGDYLTLHF LLYGALTAAI LLLIRARGRK AHAYAAKHPT HGLEKLESLP DPVHPRISIA ALAIASVAAI AYNIIGFGLP LDSYVFSFMP IEPRLYLIAA IACGTIPYFI TAEWMAHGAG AKRGAYALAK FCFLASLAFA VALNLQKLFF LIIIVPAILL LFIAFGVISN WTYKATNHPL PGALANAILF AWAIAVTFPM VIR
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