| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3755 |
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| Symbol | |
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| ID | 4024271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4191548 |
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| End bp | 4193170 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963959 |
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| Product | chlorophyllide reductase subunit Y |
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| Protein accession | YP_570877 |
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| Protein GI | 91978218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02015] chlorophyllide reductase subunit Y |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00652475 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTCA TGCCCCGCTA TTCCGGCCCG ATCGGCGAAT CGATCGTCAG CGATCCGACC
GACATGGACG TTTCGGCGGA TGCTGACGGC GCTGTGCCTG CTGCTGCCGG CACGACGCCC
GCGATCAATG CGGCGGCGAC CAAGGCCGAT GGTCTCGGTT GCCACGCCGG CGCCGCCGAA
ATGAAGGCTG CCGCCGAGAG CGCCGGCAAG AGCGAAATTC TCGAACGCTA CGCCGAAGAC
TATCCGAAGG GGCCGCACGA TCAGCCGCAG AGCATGTGTC CGGCGTTCGG GTCGCTGCGC
GTCGGGCTGC GGATGCGCCG CACCGCGACG ATCCTGTCCG GCTCGGCCTG CTGCGTCTAC
GGCCTGACCT TCACGTCGCA TTTCTACGGC GCGCGCCGCA CCGTCGGCTA CGTGCCGTTC
AGTTCGGAAA CGCTGGTCAC CGGCAAGCTG TTCGAGGACA TCCGCGAGGC GGTGTTCAAG
CTCGCTGATC CCGAGCACTA CGACACCATC ATCATCACCA ATCTTTGCGT ACCGACTGCT
TCCGGCGTGC CGCTCGATCT GCTGCCGAAT GAAATCAACG GCGTGCGCAT CATCGGCATC
GACGTGCCGG GCTTCGGCGT GCCGACCCAT GCCGAAGCCA AGGACGTGCT GTCCGCGGCG
ATGCTGGAAT ACGCCCGCAA GGAAGCGGAG CAGGGCCCAG TGCAGGCGCC CCGCGGCGGC
CGCAGCGAGC GGCCGACCGT GACGCTGCTC GGCGAGATGT TTCCGGCCGA TCCGGTCGGC
ATCAACATGA TGCTGGAGCC GCTCGGTCTC GCTGCCGGTC CGGTCGTGCC GACCCGCGAA
TGGCGCGAAC TCTATGCTGC GCTCGACTGT CAGGTGGTCG CGGCGATCCA TCCGTTCTAC
ACCGCTTGCA TCCGTCAGTT CGGTCTCGCC GGCCGCAAGA CCGTCGGCTC GGCGCCTGTC
GGCCATGACG GCACCGAAGC CTGGCTCGAG GCGATCGGCA CCGCTTGCAA CGTCGAGCGC
GCCAAGATCG ACGCCGCCAA GAACCGTTTC CTGCCCGCGA TCAAGGCGGC GCTCGCCGCC
AAGCCGATCA ACGCTCGTAT CACCGTGTCG GGCTATGAAG GTTCGGAATT GCTGGTCGCG
CGGCTGCTGA TCGAGAGCGG CGCGCAGGTA CCTTATGTCG GAACTGCGGC TCCGCGCACG
CAATGGTCGG ATCCGGATCG CGAATGGCTC GAGGCCAAGG GCGTTCAGGT TCAGTACCGC
GCTTCGCTCC AGCATGATTA TGCGGCGATC GACGAGTTCA AGCCGGACCT GGCGATCGGC
ACCACGCCGG TGGTGCAGAA GGCCAAGACC ATGGCGATCC CGGCTTTGTA TTTCACCAAC
CTGATCTCGG CGCGGCCGCT GTTCGGCGTC GCTGGCGCCG GCTCGCTGGC GCAGGTGGTC
AACGCCGCGC TCGGAAATCA GGCGCGCTTC GACGAGATGA AGGAATTTTT CGGCGAGGTC
GGGCAGGGCT TTGCGGCGGG CGTCTGGGAA GACACCCCGA AAGACAATCC GGCCTTCCGC
GAGAAATACA GGAAGCAGAT CGAAGCCGCA GCCAAGAAGC GCAAAGCTGA GGAGATGATC
TGA
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| Protein sequence | MTVMPRYSGP IGESIVSDPT DMDVSADADG AVPAAAGTTP AINAAATKAD GLGCHAGAAE
MKAAAESAGK SEILERYAED YPKGPHDQPQ SMCPAFGSLR VGLRMRRTAT ILSGSACCVY
GLTFTSHFYG ARRTVGYVPF SSETLVTGKL FEDIREAVFK LADPEHYDTI IITNLCVPTA
SGVPLDLLPN EINGVRIIGI DVPGFGVPTH AEAKDVLSAA MLEYARKEAE QGPVQAPRGG
RSERPTVTLL GEMFPADPVG INMMLEPLGL AAGPVVPTRE WRELYAALDC QVVAAIHPFY
TACIRQFGLA GRKTVGSAPV GHDGTEAWLE AIGTACNVER AKIDAAKNRF LPAIKAALAA
KPINARITVS GYEGSELLVA RLLIESGAQV PYVGTAAPRT QWSDPDREWL EAKGVQVQYR
ASLQHDYAAI DEFKPDLAIG TTPVVQKAKT MAIPALYFTN LISARPLFGV AGAGSLAQVV
NAALGNQARF DEMKEFFGEV GQGFAAGVWE DTPKDNPAFR EKYRKQIEAA AKKRKAEEMI
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