| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3730 |
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| Symbol | |
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| ID | 4024246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4163878 |
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| End bp | 4164642 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963934 |
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| Product | photosynthetic reaction center subunit H |
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| Protein accession | YP_570852 |
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| Protein GI | 91978193 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01150] photosynthetic reaction center, subunit H, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0219155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00401595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACCCG GAGCGTATTT GGACTTAGCA CAGGTTACCC TGTACGTATT TTGGATCTTC
TTCGCCGGCT TGATTTTCTA TCTTCGCCGG GAAGATAAGC GCGAAGGATA TCCGCTCTAC
TCCGACACGG GTGGCGGCCG TCTGAAGCAG ATCGGCATTC CGAATCCGCC GGATCCGAAG
ACCTATCTGC TGCGTGGCGG TGCGACCAGG ACCGTGCCGA ACGCCAGCAA CGATCGCCCG
AACGTCGCTT TGGCCCCGGT TGCGCCGTGG CCGGGTGCGG CCTTCGCGCC GACCGGTGAC
CCGTTCGCCG ACGGCGTCGG CCCGGGCTCC TACGCCCAGC GTCAGGACGT GCCGGAACTC
ACCCTCGACA ACCTGCCGGT GATCGCGCCG CTGCGCGCGG CCAAGGGCAT GTTCCTCGAT
CACCGTGACC CGAACCCGGT CGGCATGGCA GTGGTTGGCT GCGACGGCCA GGTCGGCGGC
ACGGTGACCG AAGTCTGGGT CGATCGGGCT GAAGTGCTCG CTCGCTACCT CGAAGTCGAA
GTCGCCAAGA CCAAGAAGCG CGTGCTTCTC CCGGTCCCGT TCGCGCTGAT CAACAGCCCG
AGCGGCAAGG TCTCCGTCGA CGCCATCCGT GGCGACCAGT TCGCTGGCGT CCCGACCACG
GCGAAGCCGG ACCAGGTGAC CAAGCTCGAA GAAGACAAGA TCTGCGCGTA TTATGGCGCT
GGCACCCTCT ACGCCACTCC GTTGCGTCAG GAGCCCATCG TATGA
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| Protein sequence | MQPGAYLDLA QVTLYVFWIF FAGLIFYLRR EDKREGYPLY SDTGGGRLKQ IGIPNPPDPK
TYLLRGGATR TVPNASNDRP NVALAPVAPW PGAAFAPTGD PFADGVGPGS YAQRQDVPEL
TLDNLPVIAP LRAAKGMFLD HRDPNPVGMA VVGCDGQVGG TVTEVWVDRA EVLARYLEVE
VAKTKKRVLL PVPFALINSP SGKVSVDAIR GDQFAGVPTT AKPDQVTKLE EDKICAYYGA
GTLYATPLRQ EPIV
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