| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3720 |
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| Symbol | |
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| ID | 4024236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4154939 |
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| End bp | 4155862 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963924 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_570842 |
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| Protein GI | 91978183 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.220422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00179613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACCACCT CGGCCGACAA CGAAGCAGCA CTGCCCGAGC AGATTGACCT CCGCAAGGAG
TTCAACGAGG TCGGAATCGG TGAGGTGCTC GATCAGCTCG ATCGTGAGCT GATCGGGCTC
AAGCCGGTGA AGACGCGGAT CCGCGAGATC GCGGCGCTGC TGCTGGTCGA ACGGCTGCGC
AAGCGGATGG GCCTCGCCAC CGGCAACCCG ACGCTGCACA TGTCGTTCAC CGGCAATCCC
GGCACCGGCA AGACGACGGT GGCGCTGCGG ATCGCATCGA TCCTGCACAG GCTCGGCTTC
GTTCGCCGCG GCCACGTCGT CTCGGTGACG CGCGACGAGT TGGTCGGCCA ATACATCGGC
CACACCGCGC CGAAGACCAA GGAAGTGCTA AAAAAAGCGA TGGGCGGCGT GCTGTTCATC
GACGAGGCCT ACTATCTGTA TCGCCCGGAA AACGAGCGGG ACTACGGCCA GGAGGCGATC
GAAATTCTGC TGCAGGTGAT GGAGAACCAG CGCGACGATC TGGTGGTGAT CCTCGCCGGC
TATGCCGACC GAATGGAGAA ATTCTTCGCC AGCAATCCGG GCTTCCGCTC CCGAATCGCG
CATCACATCG ACTTCCCCGA CTACGGCGAC GATGAGTTGC TGTCGATCGG GGAGGGGATG
CTGCGCGAGC AGAATTATCA CTTCGACGCC GATGCCCGGC AGGCTTTCGA GCGCTACATC
GCGACGCGCA AGACCCAGCC GCTGTTCGCC AACGCCCGCT CGATCCGCAA CGCGCTGGAC
CGTATCCGTC TGCGCCAGGC CAACCGCCTG ATCGCCGACC TCGACCGCAA GCTCACGGCA
GATGATCTGA TGACGATCGA GGCAAAGGAC GTGCTGGCGA GCCGGGTGTT CGGGATGGGA
GAGGGCGGTG AGAGAGGGAC GTAA
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| Protein sequence | MTTSADNEAA LPEQIDLRKE FNEVGIGEVL DQLDRELIGL KPVKTRIREI AALLLVERLR
KRMGLATGNP TLHMSFTGNP GTGKTTVALR IASILHRLGF VRRGHVVSVT RDELVGQYIG
HTAPKTKEVL KKAMGGVLFI DEAYYLYRPE NERDYGQEAI EILLQVMENQ RDDLVVILAG
YADRMEKFFA SNPGFRSRIA HHIDFPDYGD DELLSIGEGM LREQNYHFDA DARQAFERYI
ATRKTQPLFA NARSIRNALD RIRLRQANRL IADLDRKLTA DDLMTIEAKD VLASRVFGMG
EGGERGT
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