| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3708 |
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| Symbol | |
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| ID | 4024224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4139967 |
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| End bp | 4141232 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963912 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_570830 |
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| Protein GI | 91978171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.716563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTG GCGCAAATTC CGGACCACGA AAAACAACAA GAGCCAGGGA GCAATTCGCC
ATGGACGACG GCATTTTCAG CGGCCTCAAG GTGCTCGACT GCGCCAGCTT CATCGCAGCG
CCCGCGGCGG CCACCGTGCT GTCGGACTTC GGCGCCGACG TCATCAAGAT CGAACCGCCG
GGCGCCGGCG ATCCCTATCG GAACCTGCCG AATTTGCCGG GCTATCCGCG CAGCGAGCAC
AACTACGCGT GGATGATGGA ATCCCGCAAC AAGCGCAGCC TCGCGCTCGA CCTCGCCAAG
CCGGAGGGCC AGGCCGTGCT GCGCAGGCTC GTCGCCGAGG CCGACGTGTT CATCACCAAC
TTTCCACCGC CGGTGCGCGC GCGTCTCGGC ATCGCCTACC CTGATTTGGC GCCGCTCAAC
GACCGACTGA TCTATGCGAG CTTCACCGGC TACGGCGAGC GCGGCGAGGA GGCCAACAAG
CCCGGCTTCG ACAGCAACGC ATGGTGGGCG CGATCCGGCA TGATGGATCT GGTGCGCGCC
GACGAGGACA CCACGCCTGC GCGGTCGCTG GCGGGGATGG GCGATCACCC CTGCGCGATG
GCGCTGTATG GTGCGATCGT CACCGCGCTG TACAAGCGCG AACACAGTGG CAAGGGCAGC
GAGGTGAAAT CCAACTTGAT GGCCAACGGC GTGTGGTCAT CGAGCGTGTT GGCGCAGGCC
AAGCTGGTCG GCGCCGAATT TCAACCGCGG ATGCCGCGCG AACGCGCGCT CAACGCCGTG
GCCAATCACT ACCGCTGCCG CGACGGCCGC TGGTTGATCC TGTCGCTGCT CAACGAGGAG
AAGCAGTGGC CGACGCTGAT GCGGTGCCTC GGCCGCGAGG ACCTGACCGA CGATCCGCGC
TTCGCAACCA AGCCCGACCG CCACGCCCGC TCGATCGAAC TGATCGGGAT CTTCGACGGG
ATCTTCGCAA CGCGCGATCT CGCGGACTGG CGCAAGACGC TCGATGGCAA CGGGTTGGTT
TTCGGCGTGG TCGGCATCCT CGACGACATT CCGAACGACC AGCAGATGAT CGACAACGAT
GTGCTGGTGC CGTTCGAAAA CAACACGATA CTTACCGTCA ACAGCCCGAT CTGGGTCGAA
GGCAGCGCCA AGATCCGGCC GCGGCTGCCG CCCGCCGTCG GTGAGCACAG CGACGAGGTG
CTTCGCAGCG CCGGCTATGA CAACGAAGCG ATCCGCGCGC TTCGGGCGTC CGGCGCGGTG
GGATAA
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| Protein sequence | MRAGANSGPR KTTRAREQFA MDDGIFSGLK VLDCASFIAA PAAATVLSDF GADVIKIEPP
GAGDPYRNLP NLPGYPRSEH NYAWMMESRN KRSLALDLAK PEGQAVLRRL VAEADVFITN
FPPPVRARLG IAYPDLAPLN DRLIYASFTG YGERGEEANK PGFDSNAWWA RSGMMDLVRA
DEDTTPARSL AGMGDHPCAM ALYGAIVTAL YKREHSGKGS EVKSNLMANG VWSSSVLAQA
KLVGAEFQPR MPRERALNAV ANHYRCRDGR WLILSLLNEE KQWPTLMRCL GREDLTDDPR
FATKPDRHAR SIELIGIFDG IFATRDLADW RKTLDGNGLV FGVVGILDDI PNDQQMIDND
VLVPFENNTI LTVNSPIWVE GSAKIRPRLP PAVGEHSDEV LRSAGYDNEA IRALRASGAV
G
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