Gene RPD_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3677 
Symbol 
ID4024192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4103388 
End bp4103858 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID637963881 
ProductCheW-like protein 
Protein accessionYP_570800 
Protein GI91978141 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.340799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC AGGTCGATGC CATCAGCGGC AACACCACCC AATTCGCCAC TGCGATGATC 
GGCGGACAGC TGTTCGGGCT GCCGATCTCG CGTGTCCAGG ACGTGTTCAT GCCGGAGCGT
CTGACGCGGG TGCCGCTGGC GCCGGACGAC GTCGCCGGCG TGCTTAATCT GCGCGGCCGC
ATCGTCACCG CGATCGATAT GCGTGCCCGT CTCGGTCTGC CGAAAAACAG CGAGAACAAA
CCTCCGATGG CGATGGGCGT CGATCTGCGC GGCGAGTCCT ACGGCCTGCT GATCGATACG
ATCGGCGAGG TGCTGACGCT TCCTGACGAA GGCCGCGAGG TCAATCCGGT CAATCTGGAT
CCGCGGATGG CTTCGTTCGC CAACGGGGTT CATCGTCTCG ACGGCCAGCT GATGGTCGTT
CTCGACGTCG ACAAGGTTCT TGAAATCGCG AATGCGCGGA TGGCTGCGTA G
 
Protein sequence
MSRQVDAISG NTTQFATAMI GGQLFGLPIS RVQDVFMPER LTRVPLAPDD VAGVLNLRGR 
IVTAIDMRAR LGLPKNSENK PPMAMGVDLR GESYGLLIDT IGEVLTLPDE GREVNPVNLD
PRMASFANGV HRLDGQLMVV LDVDKVLEIA NARMAA