| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3656 |
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| Symbol | |
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| ID | 4024170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4079834 |
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| End bp | 4081918 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963860 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_570780 |
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| Protein GI | 91978121 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AGAACCACAA GCGGAAGTCG GCCGATCGTC CGAAAAATCG GATGCCGGCG
CAATGGGCCG CCAAGGGCGT CCCCGTGACC ATGAAGGTCG ATGAAGCGAC CCGCACGATC
ACGCAAGCCA AGAGCGAGGA CAGGTTCGAC CTTCCCGACG AAATGGATGA ATCCGCACCG
AATGCGGAAA AGCCGAAAGC TCCCCAGGCC CGGCCACGCA CCAGTGCGAT GACCGCCATC
GTCGGCTCGC TGTTCGATGC CTCGATCCCG CGGGATGTTC GCCGCCGGCT GAACCATGCC
AAGGCCCTCG CGGTCGTAGT CCTGGTCCCG GGACCCGCGT GGGTCGTGCC GGCCGAGATC
TACTTTCGGG ATGTCTTTGG GACCCGGTGG ATCCGGCATG CACGCGATGG CGCCGCAAAG
AGCTCGCTGA AGTCGTCGGG TGACTCCGAC GAGGCAGCAA GGGATCTTGC CCGGGGACGC
TGCGTGGTGG GCTTCGCTGC CGACGCCAGC CATCTTCCTT CGACGCTCGT CACTGCCGCC
GACATCACGA TCCGCCTTTC CGCTCCGACA GGACCGGTTC TCCGTACGGC GATCACGCGC
TTTGCGAGAC GTTCGCCCGG TGATCTCGCC GAAGGCCATG CGGTCGGCCT CGATCTCAGC
GACATCGTGG CCGCATTCCG CCCGGGCTCC GGAGCGGAGC GCATCGCGCA GCGGCTGGCG
AACTCTGTTT CGATCGTCAA CGGAACCGGC GGTCCCGGGG AATCGATCCC CGATCTGTCC
TCAGCCGTGG AATATGGAGC GGCACAGAAA TTTGGTCTGG GTCTCGCTCG AGACGTCAGA
GATTATCGTT TAGGAATTAT TTCCTGGTCC GACCTGCCTC GCGGAATAGT GCTGCACGGC
GAGGTCGGCA CCGGCAAGTC GCTTTACGCA AGAATGCTGG CGAGCGCGTG CGCACTACCT
CTGGTTTCAA CATCTGTTGC CGACTGGTTT ACCGGACCAC GTGGAGGGTA CCTCCACGAC
GTCATAGCAC AGATGCGCGG TGCCTTCGAT CGGGCAACTT CGCTCGCCGG CGCTAAGGGC
TGCTGCCTGC TCTTTATGGA TGAATTAGAT AGCATTCCCA ACAGGTTGAC CCTTGATAGC
AGAAATTCCG ACTACTGGAA ACCGCTTTGC AACGATCTGT TGACCCGCCT GGATAATTCC
ATGTCCGATA CCAGACGGGG AATCATAGTC GTATCGGCTA CAAACAACCT AAGCGCGATC
GATCCTGCTT TGATGCGCCC CGGCCGACTC GAATTGGCGA TCGAGATTGA AAGGCCCGAT
TTCGCCGGCA CTCTGAACAT CCTCCGCCAC CACGCGCCCG ACCTTCCGCA CGCGGACCTC
TCCGTAATCG CGTCCCTCGC CGAACGTTCG ACGGGCGCCG AGATCATGTA CCTGGTGCGC
GAGGCGAGGC GCCGGGCGCG TCATGCCGGC CGTGCGCTGA CGCTCGAAGA TCTGAAATCC
ACGCTGATGC CTAAGATAGA GGTAGGCGCG GACGGATTCT GGCGGATTTG TCTGCATGAG
GCGGGGCATG CCACCGCGGC GCTCTGCCTC CAGTCCGGAA CGGTCCGTCG CATCGTGGTT
GGATATCGCG TCGGCTCCGG TGGCCACACG CTGATCGAGC CGGGCAAAGA CGATCTGCTC
ACTCGCGAAC GCCTCGAGGA TCGGGCGATC ACTCTTCTTG CAGGTCGTTC CGCGGAGCGT
GTCGTCCTCG GGAGCGAATC CGCCGGCGCG ACCGGGGATC TGGAAAGCGT GACCCAGATC
GTAGCATCCA TGCATGCGAG CGCCGGCATG GGCGACACGA TCGCCTTTCT CGCGCCGGCG
GCTTCGGCGC TCGACGCGCT CCGCATGGAT CCCGGGCTGC AGGCCCGCGT CGAATACGAT
CTCCAGCTTC TGCAGCGACG CGCGGACGAG ATCATCCGTC GTCAGCGCGC AGCCCTGATC
GCAATCGCGG TCGCGCTGCG CGACCACCGT CACCTCTCGG GGGAGGCCGC CCGCGAGATA
TTCCTCAGGC ATGCCCTCCC GGCCGTCGCA ACCCCGTCCA AGTAG
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| Protein sequence | MKKKNHKRKS ADRPKNRMPA QWAAKGVPVT MKVDEATRTI TQAKSEDRFD LPDEMDESAP
NAEKPKAPQA RPRTSAMTAI VGSLFDASIP RDVRRRLNHA KALAVVVLVP GPAWVVPAEI
YFRDVFGTRW IRHARDGAAK SSLKSSGDSD EAARDLARGR CVVGFAADAS HLPSTLVTAA
DITIRLSAPT GPVLRTAITR FARRSPGDLA EGHAVGLDLS DIVAAFRPGS GAERIAQRLA
NSVSIVNGTG GPGESIPDLS SAVEYGAAQK FGLGLARDVR DYRLGIISWS DLPRGIVLHG
EVGTGKSLYA RMLASACALP LVSTSVADWF TGPRGGYLHD VIAQMRGAFD RATSLAGAKG
CCLLFMDELD SIPNRLTLDS RNSDYWKPLC NDLLTRLDNS MSDTRRGIIV VSATNNLSAI
DPALMRPGRL ELAIEIERPD FAGTLNILRH HAPDLPHADL SVIASLAERS TGAEIMYLVR
EARRRARHAG RALTLEDLKS TLMPKIEVGA DGFWRICLHE AGHATAALCL QSGTVRRIVV
GYRVGSGGHT LIEPGKDDLL TRERLEDRAI TLLAGRSAER VVLGSESAGA TGDLESVTQI
VASMHASAGM GDTIAFLAPA ASALDALRMD PGLQARVEYD LQLLQRRADE IIRRQRAALI
AIAVALRDHR HLSGEAAREI FLRHALPAVA TPSK
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