Gene RPD_3632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3632 
Symbol 
ID4024146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4054478 
End bp4055923 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content62% 
IMG OID637963836 
Producthypothetical protein 
Protein accessionYP_570756 
Protein GI91978097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.454242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG GAATTCAGCC CGATGCGCGC GAAGCACGGA CGGACGGCGC CGTCGCGCTG 
GATCGCGACA TCATCTTCAT CAGTCATGCG ACTCCGAACG ACAACGAGTT TGTCCGTTGG
TTGGGAACAA GGCTGACTGG CCACGGCTAC AAGGTCTGGG CGGACATCTT CGATCTCGCG
GGTGGAACGC CGTTCTGGAT CAGCATCGAG GAGGCCCTCC GCAAACGTGC GTTGAAGGTG
ATCTTCGTCG TGTCCAAGGC GAGCTGCGAT CCGGGCCGCA GCGGCGTCAG GAACGAGATT
TCGGTCGCCG ACGCGATCAA GAAGACGCTC AAGGACCCCG AATTCATCAT CCCCGTCCGA
ATAGACGACG TACCCTTCGA CGAATTCCCG ATCCAGATCC ACCAGCTAAA CGCCATCGAC
TTCACTAGCG GATGGGGCGC GAAACTCGCC GTGCTGGTCG ATACGTTGAC CAAGGCGAAG
GTGCCAAGGA CCGTCACCGA CCTCGGGGCG GAGTTCGACC GCTGGCGCAA GGTGTCCGTC
CGATCCGACG TGGTCGTTGA GAGGGGCGAA GAGCCGTTGC TCACCAGCAT CCTGCCGGTC
CTAAGTTTCC CGGACGACAT CTCGTTCTAC GAATACGACG GCGAAAAAGG CGCTTTCGAA
GATGCCGTCA GAAGCCTTCC ACACCCATCC GCCATGCATC ATCGGCTGAT GGTCAGTTTC
GCGGCCGCCG ACGAGATTCA GGCGCGCCTG CCCCCCGGCC TGACCGTCGC GCTGCGCGGC
ACAGCCAAAT TCCGGAACTT CCTGGACGGC GCGGTCACAG ATCCCATCGG ACCCAAGCGG
AACGATGCGA ACAATTGGGC CGTCCGCATG CTCCGGGAGA GCTTCGAAGC CCACCTCGCG
CAGCGCGGGC TGCTGAGTTA CGACGCTTCC GCCGGCACCG TGATGTTCTT TCCCAAGGAT
TTGCTGCCCG AAGACCGTGT CCGCTACGTC AACGCCAAAG GCAAGCGGAC GTACAAGCAG
GTCGTCGGCT TCAGCAAGGT GCTGAACGCT CACTGGCATC TCGGCATGCG CGCCGTGGTG
CGTCTGGGCG ACGTCCCAAC GGTCCGATTG AGACCCTACG TCGTCTTCAG CCGGGACGGC
AGACACCCTC TGCAGGATGC CGACGAGATG ACGAAGCTTC GGCGGCGTTT CTGCAAGAGC
TGGTTCAATC ACGTATGGCG CCCGTTATGG CAGGCGTTCT TCGAGTTCTT CGGAAATGGG
GCCGATGCAG TTCAGATCGC TCTCGGTGGT GATCGACATT GGTCGGTCGC CGGCGGGGGA
TTGAAACTCG TCGCAGCGAT GGGCATGCCC CTCGATCTGG CTGTTTCCGA CGACGAAGCC
CTGCCCGAGG AGCCCGACGA GATCGAGGAT GATGTCGAAT ACTCCGACAA TGGTGACGAT
GCATGA
 
Protein sequence
MPPGIQPDAR EARTDGAVAL DRDIIFISHA TPNDNEFVRW LGTRLTGHGY KVWADIFDLA 
GGTPFWISIE EALRKRALKV IFVVSKASCD PGRSGVRNEI SVADAIKKTL KDPEFIIPVR
IDDVPFDEFP IQIHQLNAID FTSGWGAKLA VLVDTLTKAK VPRTVTDLGA EFDRWRKVSV
RSDVVVERGE EPLLTSILPV LSFPDDISFY EYDGEKGAFE DAVRSLPHPS AMHHRLMVSF
AAADEIQARL PPGLTVALRG TAKFRNFLDG AVTDPIGPKR NDANNWAVRM LRESFEAHLA
QRGLLSYDAS AGTVMFFPKD LLPEDRVRYV NAKGKRTYKQ VVGFSKVLNA HWHLGMRAVV
RLGDVPTVRL RPYVVFSRDG RHPLQDADEM TKLRRRFCKS WFNHVWRPLW QAFFEFFGNG
ADAVQIALGG DRHWSVAGGG LKLVAAMGMP LDLAVSDDEA LPEEPDEIED DVEYSDNGDD
A