Gene RPD_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3613 
Symbol 
ID4024127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4026680 
End bp4027594 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content70% 
IMG OID637963817 
Producthypothetical protein 
Protein accessionYP_570737 
Protein GI91978078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGGG CTCGCTTGGT CAATCCCCTC GCTCTCGGTT CCATGACGTC TCGCTTCCAG 
ATCCGCGCCG GCATTGCCGT GTCCGTCCTG GCTCATCTCG GGCTGGTCGG CATCGTGCTG
CTGCTCGCCG AAGTGCGGCC GTTCGCCGAT GTTCCGGAGC AGCGCATCGA GGTCGAGGTG
GTGACCGCCG ACGAGGCCCC GCCGCCGCCG CTGCCGGAGC CCAAACCCGA AACCAAGCCC
GCGCTCGATC TGCCTGAGAT CAAGCCGGAG TCGGAGACCA AGCCGGCCTC GCCGCCGCCG
GAACCGGCCG CGCCACAGCC GCCGCTCAAG CCCGAGCCCG TGAAGCCTGA GCCGAAGCAG
CAAAAGGCCG AAGCGCCCAA GCCCGAGTTC AAGCCCGACC TCAAGCCCGA GCCGGCGAAA
CCCGAAGCTG CGCCCCCGCA ACCGACGCCG GCCGCCTCTC CTGCTCCGAC GTCCGCGCCC
CAGGCGCAGC AGCCGGCGCC GTTTCCGCCG GCGATTCCGC AGGAGCCGGA CATCACGGTG
CGATATTCCG TAGCGCTCGG GCTTCCCGCC GACCCCACCT TCGACGCCCC GGCAGAGACC
GTCGCCGATA TCAGCGCCGA AGCGGTCGCG GCGTTGCGGC AACGCTTGAA GTCATGCGCG
GCGCTGCCGG CGTCGGTGGC GCCGTCCGAC AATGTCAAAA TCGTGCTGCG GGTGGCGCTG
CAGCCCGACG GCCGGCTGGC GCAGGAGCCG GTGCTGATCG AGGCCAGCGC CTCGGCGAAA
GGCCCGGCGC TGATGAAGGG CGCGATCGAC TCGCTGACCG CATGTCAGCC CTACACCATG
CTGCCGGTCG AGAAATACAA AGAGTGGAAG GTGCTCGACC TCGGCTTCAC CCCGCAGGAT
TTCCGCGGCG GCTAG
 
Protein sequence
MLRARLVNPL ALGSMTSRFQ IRAGIAVSVL AHLGLVGIVL LLAEVRPFAD VPEQRIEVEV 
VTADEAPPPP LPEPKPETKP ALDLPEIKPE SETKPASPPP EPAAPQPPLK PEPVKPEPKQ
QKAEAPKPEF KPDLKPEPAK PEAAPPQPTP AASPAPTSAP QAQQPAPFPP AIPQEPDITV
RYSVALGLPA DPTFDAPAET VADISAEAVA ALRQRLKSCA ALPASVAPSD NVKIVLRVAL
QPDGRLAQEP VLIEASASAK GPALMKGAID SLTACQPYTM LPVEKYKEWK VLDLGFTPQD
FRGG