| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3592 |
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| Symbol | |
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| ID | 4024106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4004229 |
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| End bp | 4005206 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963796 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD |
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| Protein accession | YP_570716 |
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| Protein GI | 91978057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.318937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.834201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAC CGCAGCACGT ATTCGATCCG CCGTTCAACA TCATCCGTTG CAGCCATGTC
GTGCTCGACG TCACCGACCT TGCGGCGAGC GTGGATTTCT ACGCCGAGAT CATCGGCCTG
CATGTCGAGG ATCGCGACGA CGCGACCGCG TATCTGCGCG GCAGTGAAGA GCATCAGCAT
CATTCACTGG TGCTGCGACA GGCCGACAGA CCGGCCGCGG CGCGGCTCGG CTTCCGCGTC
GGCGGCGAGG CTGATCTCGA CAAAGCCGGC AGCTTCTTCG CCGAGAACGG GCTGATCTAC
AGCTTCGTCG ATCGGCCGTT CCAGGGCCGC ACGCTGCATG TCACCGACCC GTTCGGCTTC
CGGCTCGAAC TCACCGCCAG CATCGAGAAG CGGCCGCATC TGTTGCGGCG CTACGAATTG
TACAAGGGCT GCCACCCGCA GCGGCTCGAC CATTTCAACG TATTCGCCGC CGAGACCCAG
GACACCATCG ACTTCTATGC CCGGCTCGGC TTCCGCCTCA CCGAATATGC CGAGGAAGAC
GGCGAGAACG GCCGGATCGC CGCGGCCTGG ATGCACCGCA AGGGCAATGT CCATGATTTC
GCGATCACCA ACGGCCGCGG CCCGCGGCTG CATCATTTCG CCTATTGGGT GCCCGGCCCG
CTCAACATCA TTCACCTGTG CGACGTGATG GCATCACGCG GGCTCGGCCT CGAGCGCGGC
CCCGGCCGCC ACGGCATCTC GAATGCGTTC TTTCTCTACG TCCGCGATCC CGACGGCCAC
CGCATCGAGC TGTATTGCAG CGATTACCAG ACCATGGATC ACGATCACGA GCCGCTGCGC
TGGTCGCTGC GCGATCCGCG CCGCCAGACG CTGTGGGGCG CGCCCGCGCC GCGCTCCTGG
TTCGAGCAGG GCTCGGAATT CCTCGGCGAA ACGGTTCGCG AGCCGGCCTT CGTGGCCGAT
GTGATGATTG CGGATTGA
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| Protein sequence | MPVPQHVFDP PFNIIRCSHV VLDVTDLAAS VDFYAEIIGL HVEDRDDATA YLRGSEEHQH
HSLVLRQADR PAAARLGFRV GGEADLDKAG SFFAENGLIY SFVDRPFQGR TLHVTDPFGF
RLELTASIEK RPHLLRRYEL YKGCHPQRLD HFNVFAAETQ DTIDFYARLG FRLTEYAEED
GENGRIAAAW MHRKGNVHDF AITNGRGPRL HHFAYWVPGP LNIIHLCDVM ASRGLGLERG
PGRHGISNAF FLYVRDPDGH RIELYCSDYQ TMDHDHEPLR WSLRDPRRQT LWGAPAPRSW
FEQGSEFLGE TVREPAFVAD VMIAD
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