| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3533 |
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| Symbol | |
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| ID | 4024047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3922185 |
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| End bp | 3923294 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963737 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_570657 |
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| Protein GI | 91977998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0507851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT ATATCGCCCG CCGCATCCTG CTGATGTTTC CGACCCTGCT CGGCATTCTG
TTCGTGTCCT TCGTTGTGGT GCAGTTCGCG CCGGGCGGAC CGGTCGAGCG GGTGATCGCG
CAGCTGTCAG GCGCCGACAC CGGCGCGGCC TCGCGCGTCT CCGGGTCGTC CGGCGGCGAC
TTCGGCGGAC GGCCGCAGGC CGGCGCCTCC GCCGACGCGG TCAATTCGAA ATATCGCGGC
GCGCAAGGGC TCGATCCGGA ATTCGTCAAG AGCCTGGAGA AACAGTTCGG GTTCGACAAA
CCGGCGCCCG AGCGCTTTGC GATCATGCTG TGGAATTTCG CGCAGTTCGA CTTCGGAAAG
AGCTATTTCC GCGACGTCAG CGTGCTGCAA TTGATCAAGG AGAAGCTGCC GGTCTCGATG
TCGCTCGGGA TATGGATGAC GCTGCTGACC TATCTGATCT CGATCCCGCT CGGCATCCGC
AAGGCGGTGA AGGACGGCTC GAAGTTCGAC ACCTGGACAT CGGCGGTGAT CATCGTCGGA
TTTGCGATCC CGGGCTTCCT GTTCGCGATC CTGCTGATCA TCCTGTTCGC CGGCGGATCG
TTCTTCAGCT GGTTCCCGCT GCGCGGGCTG ACATCCGACG GCTGGAGCCA GTTCCCCTGG
TACTGGAAGA TCATCGACTA TTTCTGGCAT CTGGCGCTGC CGCTGACCGC GATGGTGCTC
GGCGCCTTCG CGACCATGAC GCTGCTGACA AAGAACTCGT TCCTGGACGA GATCCGCAAG
CAATATGTGA TGACCGCCCG CGCCAAGGGC TGTAGCGAAA CGCAGGTGCT GTACGGCCAC
ATCTTCCGCA ACGCGATGCT GATCGTGATC GCCGGCTTCC CGGGCGCTTT CATCCACGCG
TTCTTTTCCG GCTCGCTGTT GATCGAGACC ATCTTCTCGC TCGACGGGCT CGGCCTGCTC
GGCTTTGAAA GCGTGCTGAA CCGCGATTAC CCGGTGGTGT TCGGCACGCT GTTCATTTTT
TCGCTGGTCG GCCTCGTGGT CAATCTGGCC TCTGATCTCA CCTATATGTG GATCGATCCG
CGGATCGATT TCGAGGCGCG GGAAGTCTGA
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| Protein sequence | MSAYIARRIL LMFPTLLGIL FVSFVVVQFA PGGPVERVIA QLSGADTGAA SRVSGSSGGD
FGGRPQAGAS ADAVNSKYRG AQGLDPEFVK SLEKQFGFDK PAPERFAIML WNFAQFDFGK
SYFRDVSVLQ LIKEKLPVSM SLGIWMTLLT YLISIPLGIR KAVKDGSKFD TWTSAVIIVG
FAIPGFLFAI LLIILFAGGS FFSWFPLRGL TSDGWSQFPW YWKIIDYFWH LALPLTAMVL
GAFATMTLLT KNSFLDEIRK QYVMTARAKG CSETQVLYGH IFRNAMLIVI AGFPGAFIHA
FFSGSLLIET IFSLDGLGLL GFESVLNRDY PVVFGTLFIF SLVGLVVNLA SDLTYMWIDP
RIDFEAREV
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