| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3500 |
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| Symbol | ureC |
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| ID | 4024014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3890446 |
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| End bp | 3892158 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963704 |
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| Product | urease subunit alpha |
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| Protein accession | YP_570624 |
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| Protein GI | 91977965 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGA AAATCTCGCG GTCCGTCTAT GCCGACATGT TCGGCCCGAC CACCGGCGAT
CGCGTCCGGC TTGCCGACAC CGATCTGATC ATCGAGGTCG AGAAGGACTT CACGACCTAC
GGCGAGGAGG TGAAGTTCGG CGGCGGCAAG GTGATCCGCG ACGGCATGGG GCAGTCGCAG
GTGACCAACA AGGACGGCGC CGCCGACACG GTCATCACCA ACGCGCTGAT CGTCGATCAC
TGGGGCATCG TCAAGGCCGA CGTCGCAATC AAGGCCGGGA TGATCAGCGC GATCGGCAAG
GCCGGCAATC CGGACATCCA GCCGGGCGTC GATATCATCA TCGGCCCGGG CACCGACGTG
ATCGCGGGCG AGGGCAAGAT CCTCACCGCC GGCGGCTTCG ACAGTCACAT CCATTTCATC
TGCCCGCAGC AGATCGAACA TGCCTTGATG AGCGGCGTCA CCACCATGCT CGGCGGCGGC
ACCGGGCCAT CGCACGGCAC CTTCGCGACC ACCTGCACGC CGGGGCCGTG GCATATCGGC
CGGATGATTC AGTCGTTCGA TGCCTTCCCG GTCAATCTCG GCATTTCCGG CAAGGGCAAC
GCGGCGCTGC CCGGCGCGCT GATCGAGATG GTAGAGGGCG GCGCCTGCGC GCTGAAGCTG
CACGAGGACT GGGGCACGAC GCCGGCGGCG ATCGACAATT GCCTCACCGT CGCCGACGAT
CACGACGTGC AGGTGATGAT CCATTCCGAC ACGCTGAACG AGAGTGGCTT CGTCGAGGAC
ACCATCAAGG CGTTCAAGGG CCGCACCATC CACGCTTTCC ACACCGAGGG CGCCGGCGGC
GGCCACGCGC CGGACATCAT CAAAGTTGCC GGCCTGGAGA ACGTGCTGCC GTCCTCGACC
AATCCGACCC GGCCGTTCAC CCGCAACACC ATCGACGAGC ATCTCGACAT GCTGATGGTG
TGCCATCATC TCGATCCGTC GATCGCCGAG GATCTGGCGT TTGCCGAAAG CCGCATCCGC
AAGGAGACGA TCGCGGCGGA AGACATCCTG CACGATCTCG GCGCGCTGTC GATGATGTCG
TCGGACAGCC AGGCGATGGG CCGGCTCGGC GAAGTCATCA TCCGCACCTG GCAGACCGCC
GACAAGATGA AGAAGCAGCG CGGTTCGCTG TCGCAGGATT CCGCCCGCAA CGACAATTTC
CGCGTCAAGC GCTACATCGC CAAATACACC ATCAATCCGG CGATCGCGCA TGGCGTGTCG
AAGCTGATCG GTTCGGTCGA GACCGGCAAG ATGGCCGACC TCGTGCTGTG GTCGCCGGCG
TTCTTCGGCG TCAAGCCGGA TTGCATCGTC AAGGCGGGCA TGATCGTGGC GGCGCCGATG
GGCGATCCGA ATGCCTCGAT CCCGACGCCG CAGCCGGTGC ACTACCAGCC GATGTTCGGC
GCTTACGGCC GCGCGCTCAC CGCGTCGTCG GTGGTGTTCA CCTCGCAGGC TGCCGCAGCC
GGCCATCTTG CCCGTGACCT CGGCATCGCC AAGGCGCTGT ATCCGGTCAG CAATGTCCGT
GGCGGCATCT CGAAGAAGAG CATGATTCAC AACGACGCCA CGCCGAACAT CGAGGTCGAT
CCCGAAACTT ACGAAGTCCG AGCCGACGGC GAGTTGCTGA CCTGCGCGCC GGCCGAGGTG
CTGCCGATGG CGCAGCGCTA TTTCATGTAT TGA
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| Protein sequence | MSVKISRSVY ADMFGPTTGD RVRLADTDLI IEVEKDFTTY GEEVKFGGGK VIRDGMGQSQ
VTNKDGAADT VITNALIVDH WGIVKADVAI KAGMISAIGK AGNPDIQPGV DIIIGPGTDV
IAGEGKILTA GGFDSHIHFI CPQQIEHALM SGVTTMLGGG TGPSHGTFAT TCTPGPWHIG
RMIQSFDAFP VNLGISGKGN AALPGALIEM VEGGACALKL HEDWGTTPAA IDNCLTVADD
HDVQVMIHSD TLNESGFVED TIKAFKGRTI HAFHTEGAGG GHAPDIIKVA GLENVLPSST
NPTRPFTRNT IDEHLDMLMV CHHLDPSIAE DLAFAESRIR KETIAAEDIL HDLGALSMMS
SDSQAMGRLG EVIIRTWQTA DKMKKQRGSL SQDSARNDNF RVKRYIAKYT INPAIAHGVS
KLIGSVETGK MADLVLWSPA FFGVKPDCIV KAGMIVAAPM GDPNASIPTP QPVHYQPMFG
AYGRALTASS VVFTSQAAAA GHLARDLGIA KALYPVSNVR GGISKKSMIH NDATPNIEVD
PETYEVRADG ELLTCAPAEV LPMAQRYFMY
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