| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3484 |
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| Symbol | |
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| ID | 4023998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3870543 |
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| End bp | 3872693 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963688 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_570608 |
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| Protein GI | 91977949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGC AACTGACCGA CGAGGCTTAC GCGGTCCTGG AAGGCCGCCA CGCCGATCCG
TTTCACTATT TGGGCCCGCA TTCGGAAGAC AACCGCGTCG TTGTGCGGGC GCTGCTGCCG
GACGCAACGG CGGTCGAGGC GGTCGGCGAA CACGGCGAGA CGGCGCATCT CGAACGCGTC
CACGAATCCG GGCTGTTCGC GGGATCGCTG CCGAACGGAT CGCACCGCTA CCAGCTTCGC
GCCCGGTTCG GCGATACCAC CGTCGACCTT GAGGATCCCT ATCGCTTTCC GCCGATCCTG
ACCGACTTCG ACCTGTACCT GCTCGGCGAA GGCACCGACC AGCGGCTCTA CGACAAGCTC
GGCGCGCACC CGATGGCGCT TGAAGGCGTC AACGGCGTCG CTTTCGTGGT GCTCGCGCCG
AACGCGCGCC GCGTCAGCGT GGTCGGCGAT TTCAATTTCT GGAATCCGCG CCGGCATCAG
ATGCGGGTGC GCGGCAACGG ATATTGGGAG CTGTTCGTCC CCGGCGCCGC CGCCGGCGAT
CACTACAAGT TCGATGTCGT CGGCCCTCAC GGCGAGCAAC TGCCGCAGAA ATCCGACCCG
ATGGCGTTCG CCGCCGAGCT GCGGCCGAAG ACCGCCTCGA TCGTGGTCGA TCAGACCCGG
CTGCCGCAAC CGCGGCCCGC GCCGGCCCAG ATCAACGCGC TCGGCGCGCC GATGTCGATC
TACGAGGTGC ATCTCGGCTC GTGGCGGCGC AAGGACGGCG AGCAATGGCT GAGCTATCGC
GAGCTCGCCG AGACGTTGCC GGCCTATGTG CGCGAGATGG GCTTCACCCA TGTCGAATTC
CTTCCGGTCA GCGAACATCC GTTCGACGGC TCCTGGGGCT ATCAACCGAC CGGGCTTTAC
GCGCCGACCA GCCGGTTCGG CACGCCGGAG GATTTCTGTG CGCTGATCGA CGCCTTCCAC
GCGCAGGGCA TCGGCGTGCT GCTCGACTGG GTGCCCGGCC ACTTCCCCGA CGATCCGCAC
GGCCTCGGCC ATTTCGACGG CACCGCGCTG TACGAACACG CCAACCCGCT GCAGGGGCGG
CATCTCGACT GGGGCACGCT GATCTACAAT TACGGCCGCA CCGAAGTGGT GAACTTCCTG
GTGTCAAACG CACTGTTCTG GCTGGAGCGT TACGGCATCG ACGGCCTGCG GGTCGATGCG
GTGGCGTCGA TGCTGTATCT CGACTACAGC CGACCGGCCG ACGGCTGGGT CCCGAACAAG
TTCGGCGGCC GCGAGAACAT CGAGGCGATC GATTTCCTGC GCCGTTTCAA CGCCGAAGTG
TTCGCCAAAT TTCCGCACGT CACCACCGCG GCCGAAGAGT CGACCGCCTG GCCGCAGGTG
TCGCGGCCGG TCGAGTTCGG CGGGCTCGGC TTCGGCTACA AGTGGAACAT GGGCTGGATG
CACGACACGC TGAACTACAT CAGCAAGGAT CCGATCCACC GCAAGTTCCA CCACGGCCAG
ATCCTGTTCG GGTTGCACTA CGCGTTCTCG GAGAACTTCA TCCTGCCGCT GTCGCACGAC
GAGGTCGTGC ACGGCAAACG TTCGATCCTC GGCCGGATGC CGGGCGACGA GTGGCAGCGC
TTCGCCAATC TGCGCGCGTA CTACGCCTTC ATGTTCGCCC ACCCCGGCAA GAAGCTCATG
TTCATGGGCA GCGAGTTCGG CCAGGAGCGG GAGTGGAATC ACGACCGTTC GCTGGACTGG
CATCTGCTGG ACACCCCGAA ATACGCCGGC ATCCAGGCGC TGGTCCGCGA CCTCAACAGG
CTGTATCGCA CGCTGCCGGC GCTGCATCAG CTCGACTGCG ATCCATTCGG GTTCGAATGG
CTCGTCACCG ACGACGCCGA CCGCAACGTG TTCGCCTGGA TGCGCAAGGG CGACGACCCC
CGCGCGCGCT GCCTGGTGAT CGCCAACTTC TCACCCAATG TCTATGAGGA CTACCGCGTT
CGGGTGCCGT TCCCCGGCCG ATGGCGCGAG GCGCTCAACT CCGATTCCGC AGTCTACGGC
GGCAGCAACG TCGGCAATGC CGGCGAAGTT CACACCCTTG ACGGCTTGGT GCCCGAGCTT
AGTTTGACCA TTCCGCCGCT CGCCGCGATC TTTCTCACGC CGGAAGACTG A
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| Protein sequence | MTVQLTDEAY AVLEGRHADP FHYLGPHSED NRVVVRALLP DATAVEAVGE HGETAHLERV
HESGLFAGSL PNGSHRYQLR ARFGDTTVDL EDPYRFPPIL TDFDLYLLGE GTDQRLYDKL
GAHPMALEGV NGVAFVVLAP NARRVSVVGD FNFWNPRRHQ MRVRGNGYWE LFVPGAAAGD
HYKFDVVGPH GEQLPQKSDP MAFAAELRPK TASIVVDQTR LPQPRPAPAQ INALGAPMSI
YEVHLGSWRR KDGEQWLSYR ELAETLPAYV REMGFTHVEF LPVSEHPFDG SWGYQPTGLY
APTSRFGTPE DFCALIDAFH AQGIGVLLDW VPGHFPDDPH GLGHFDGTAL YEHANPLQGR
HLDWGTLIYN YGRTEVVNFL VSNALFWLER YGIDGLRVDA VASMLYLDYS RPADGWVPNK
FGGRENIEAI DFLRRFNAEV FAKFPHVTTA AEESTAWPQV SRPVEFGGLG FGYKWNMGWM
HDTLNYISKD PIHRKFHHGQ ILFGLHYAFS ENFILPLSHD EVVHGKRSIL GRMPGDEWQR
FANLRAYYAF MFAHPGKKLM FMGSEFGQER EWNHDRSLDW HLLDTPKYAG IQALVRDLNR
LYRTLPALHQ LDCDPFGFEW LVTDDADRNV FAWMRKGDDP RARCLVIANF SPNVYEDYRV
RVPFPGRWRE ALNSDSAVYG GSNVGNAGEV HTLDGLVPEL SLTIPPLAAI FLTPED
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