Gene RPD_3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3470 
Symbol 
ID4023984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3849939 
End bp3850415 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID637963674 
Productglutathione peroxidase 
Protein accessionYP_570594 
Protein GI91977935 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA TTCAGGACTT CACGGCCAAG ACACTCGCGG GCGAGGAGCT GCCGTTGAAG 
CGGTTCGAAG GCCAGGTGCT GCTGATCGTC AACACCGCCA GCGCCTGCGG ATTCACTCCG
CAATACAAGG GCCTCGAAGC GCTGCAGAAA ACCTACGGAC CACGCGGCTT TTCGGTGCTG
GGCTTTCCCT GCAACCAGTT CGGCGCGCAG GAGTCCGGAA ACGAAACCGA GATTGCGCAA
TTCTGCTCGA CCAACTACGG CGTCAGCTTT CCGATGTTTG CGAAGATCGA CGTCAATGGC
GCGAACGCGC ATCCGCTGTA CAAGTTTCTG AAGGATGAGA AATCCGGCCT GCTCGGTTCG
GCGATCAAAT GGAATTTCAC CAAATTCCTG GTCGATCGCG CCGGCCATGT GGTATCGCGA
CACGCGCCGA CGACCACGCC GGAGTCGCTC GCAAAGGATA TCGAGACGCT GCTATGA
 
Protein sequence
MTSIQDFTAK TLAGEELPLK RFEGQVLLIV NTASACGFTP QYKGLEALQK TYGPRGFSVL 
GFPCNQFGAQ ESGNETEIAQ FCSTNYGVSF PMFAKIDVNG ANAHPLYKFL KDEKSGLLGS
AIKWNFTKFL VDRAGHVVSR HAPTTTPESL AKDIETLL