Gene RPD_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3445 
Symbol 
ID4023959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3827713 
End bp3828195 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID637963649 
Productbacterioferritin 
Protein accessionYP_570569 
Protein GI91977910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID[TIGR00754] bacterioferritin 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0660653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCG ATGCCAAGGT CATCGAATAT CTCAACCGCG GTCTGCGCAG CGAGCTGACG 
GCCATCAGCC AGTATTGGCT GCATTATCGC CTGCTCGATA ATTGGGGCCT GAAGGACCTC
GCCAAGACCT GGCGCAAGGA ATCCATCGAA GAGATGGAAC ACGCCGACAA GCTCACCGAT
CGCATCATCT TCCTCGACGG CTTCCCGAAC ATGCAGGTGC TCGATCCGCT TCGGATCGGC
CAGAACGTCA AGGAAGTGCT GAACTCCGAC CTGCAGGCCG AGATCGACGC CCGCACGCTC
TATCAGGAAG CGGCGACCTA CTGCCACAGC GTGAAGGACT ACGTGTCACG CGACCTGTTC
GAAAAGCTGA TGAAGGACGA GGAGCATCAT ATCGACTTCC TCGAAACCCA GATCGATCTG
GTCAACCGGA TCGGCGTCGA GCTGTATCAG CAGCACCACA TCGGCGAACT CGACCACGAC
TGA
 
Protein sequence
MKGDAKVIEY LNRGLRSELT AISQYWLHYR LLDNWGLKDL AKTWRKESIE EMEHADKLTD 
RIIFLDGFPN MQVLDPLRIG QNVKEVLNSD LQAEIDARTL YQEAATYCHS VKDYVSRDLF
EKLMKDEEHH IDFLETQIDL VNRIGVELYQ QHHIGELDHD