Gene RPD_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3439 
Symbol 
ID4023953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3822817 
End bp3823830 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID637963643 
Producthypothetical protein 
Protein accessionYP_570563 
Protein GI91977904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.32716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCTGC GCAAAGCTTT CATGAAAGTG TTTTCGGCCC ATCCGGTCGA AACCATCGCT 
GCCTGCACCG GTCTGTTCAT GATCGTGCTC GGCTTTGCGC TCGGCACCCA GACCGGCTGG
GTCTGGTTCT GGGGCCAGGT TTCGGCGATC TTCGGCGCCA GCCTCGCCAC CCTCGCGGTG
GTGTGGACCG TCCGTCAGCG CGCCGCCGAG GCGCGGATGG CGGCCAATCT CAACGTGCTG
GCCCGCCAGC TCGAAACCTC GATCAGCCAG ATCCACAAAT CGATCAAGGG CGGTCGAGAC
GAGTCGCTTC CCGCCGCGGT GTATCTCGCC CAGATCGAGC AGTGCATCGA CAATCTGATC
GGCGTCACCC ATGAGATCGG CGAGATCACC GGGCGGCAAT TGCCGTTCGA CGTGATCGAG
ATGCTGACCG CGCGCGAAAC GCTGCACATC GAGGCGCATA TCACCGACGC CCGCGCCCCC
GAGCGCAAGC TCGCCACCGA GACGGAGAAC TGCCCGGCCT GCAAGAAGGC GGTCGAATTC
CAGATCGGCA GCCTGCCCGG CGACAGCGCC AAGCCGACCT GCCCGCATTG CGGCCAGCGC
TTCCACGCCC ACCGCTCCAC CACCGGCAAC ATCTTTCTGC GGATGCCCGG CGCTTCGCAA
TTCACCCGCG CGGTATCGGT CAATTGCCCG GCCTGCGCCA GCAAGATCCC GGCGAATATC
GATCAGGGCA AGCAGCAATC GGAGACCCGA TTCTGCTTCT CCTGCGGGGC CAAGGTCAGC
ATCGATCCGC TCGGGCAGGA ATGCACGCTG ATCAGCAAGC AGGAGCGCCT GCCCGGTCAT
CTCAATGGCG CCGGCACGCT GGTCTGCGAG AAGTGCAGCG AGACGGCGAT CGTGCTGACC
TCGAACAGCG CCGGCACCTA CGGCATCTGC CGCAAGGACG ACGGCTTGGT GTTCCTCCCC
ACCACCACCG CCCCGCTAGC GCAGCCCGCG CCGCGCAGCG ACGCCGCCGA GTAG
 
Protein sequence
MVLRKAFMKV FSAHPVETIA ACTGLFMIVL GFALGTQTGW VWFWGQVSAI FGASLATLAV 
VWTVRQRAAE ARMAANLNVL ARQLETSISQ IHKSIKGGRD ESLPAAVYLA QIEQCIDNLI
GVTHEIGEIT GRQLPFDVIE MLTARETLHI EAHITDARAP ERKLATETEN CPACKKAVEF
QIGSLPGDSA KPTCPHCGQR FHAHRSTTGN IFLRMPGASQ FTRAVSVNCP ACASKIPANI
DQGKQQSETR FCFSCGAKVS IDPLGQECTL ISKQERLPGH LNGAGTLVCE KCSETAIVLT
SNSAGTYGIC RKDDGLVFLP TTTAPLAQPA PRSDAAE