| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3432 |
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| Symbol | |
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| ID | 4023946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3815473 |
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| End bp | 3817398 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963637 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_570557 |
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| Protein GI | 91977898 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA GGTCGAACCC CGACACGACG CGCCCCGCCG TCACCACCGG CGGCCTGCCC
TCCTCGAAGA AGATCTACGC GACGCCCGCC GCCGCGCCGG ATCTGCGCGT ACCGCTGCGC
GAGATCATTC TGTCGGAAGG CGCCGGCGAG CCGAACCTGC CGATCTACGA CACGTCGGGC
CCCTACACCG ACCCGAGCGT CACCATCGAC GTCAATGCCG GCCTGTCGCG GGCCCGCACG
CAATGGGTCA AGGAGCGCGG CGGCGTCGAA GAATATCAGG GCCGCGACGT CAAGCCGGAA
GACAACGGCA ATGTCGGCGC CGCGCATGCG GCGAAGTCGT TCACCGCCTA TCACAAGCCG
CTGCGCGGCA TCGGCGACGC GCCGATCACC CAGTACGAAT TCGCCCGCCG GGGCATCATC
ACCAAGGAGA TGATCTACGT CGCGGAGCGC GAGAATCTCG GCCGCAAGCA GCAACTCGAG
CGCGCCGAGG CGGCGCTGGC CGACGGCGAG AGCTTCGGCG CCAGCGTGCC GGCGTTCATC
ACGCCGGAAT TCGTCCGCGA CGAGATCGCG CGCGGTCGCG CCATCATCCC GGCCAATATC
AACCACGGCG AACTCGAGCC GATGATCATC GGCCGCAACT TCCTGACCAA GATCAACGCC
AATATCGGCA ACAGCGCCGT GACGTCGTCG GTGGAGGAAG AAGTCGACAA GATGGTGTGG
GCGATCCGCT GGGGCGCCGA CACCGTGATG GACCTCTCCA CCGGCCGCAA CATCCACACC
ACCCGGGAAT GGATCCTGCG CAACTCGCCG GTGCCGATCG GCACGGTGCC GATCTATCAG
GCGCTGGAGA AGTGCGAAGG CGATCCCGTC AAGCTGACCT GGGAGCTGTA CAAGGACACG
CTGATCGAGC AGTGCGAACA GGGCGTCGAT TACTTCACGA TCCACGCCGG CGTGCGGCTG
CAATACATTC ACCTCACCGC CAATCGCGTC ACAGGCATCG TCTCGCGCGG CGGCTCGATC
ATGGCGAAGT GGTGCCTCGC GCATCACAAG GAGAGCTTCC TCTACACGCA TTTCGACGAG
ATCTGCGACC TGATGCGCAA GTACGACGTG TCGTTCTCGC TCGGCGACGG CCTGCGCCCG
GGCTCGATCG CCGACGCCAA CGACCGCGCC CAATTCGCCG AACTGGAGAC GCTCGGCGAA
CTCACCAAGA TCGCCTGGGC CAAGGGCTGC CAAGTGATGA TCGAAGGCCC CGGCCACGTG
CCGATGCACA AGATCAAGAT CAACATGGAC AAGCAGCTCA AGGAATGCGG CGAGGCGCCG
TTCTACACGC TCGGGCCGCT GACCACCGAC ATCGCGCCGG GCTATGATCA CATCACCAGC
GGCATCGGCG CTGCGATGAT CGGCTGGTTC GGCTGCGCGA TGCTGTGCTA CGTCACGCCG
AAGGAACATC TCGGCCTGCC CGATCGCAAC GACGTCAAGG TCGGCGTGAT CACCTACAAG
ATCGCCGCCC ACGCCGCTGA TCTGGCCAAG GGCCACCCCG CCGCGCAACT GCGCGACGAC
GCGGTGTCCC GCGCCAGATT CGATTTCCGC TGGCAGGACC AGTTCAACCT CGGCCTCGAC
CCCGACACCG CGCAGGCGTT CCACGACGAA ACCCTGCCCA AGGACGCCCA CAAGGTCGCG
CATTTCTGCT CGATGTGCGG GCCGAAATTC TGCTCGATGA AGATCACCCA GGACGTGCGC
GACTACGCAG CGGGATTGGG CGACAACGAG AAGGCCGCGC TGTATCCGGC CGGAAGCGTC
GGGATGAGCA TCAGCGGTGT GATCGAGGAC GGCATGGCGC AGATGAGCGC GAAGTTCAGG
GATATGGGCG AGCACCTGTA TCTCGACGCC GAGAAGGTGA AGGAGAGCAA CAAGGCGCTG
TCGTAA
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| Protein sequence | MNIRSNPDTT RPAVTTGGLP SSKKIYATPA AAPDLRVPLR EIILSEGAGE PNLPIYDTSG
PYTDPSVTID VNAGLSRART QWVKERGGVE EYQGRDVKPE DNGNVGAAHA AKSFTAYHKP
LRGIGDAPIT QYEFARRGII TKEMIYVAER ENLGRKQQLE RAEAALADGE SFGASVPAFI
TPEFVRDEIA RGRAIIPANI NHGELEPMII GRNFLTKINA NIGNSAVTSS VEEEVDKMVW
AIRWGADTVM DLSTGRNIHT TREWILRNSP VPIGTVPIYQ ALEKCEGDPV KLTWELYKDT
LIEQCEQGVD YFTIHAGVRL QYIHLTANRV TGIVSRGGSI MAKWCLAHHK ESFLYTHFDE
ICDLMRKYDV SFSLGDGLRP GSIADANDRA QFAELETLGE LTKIAWAKGC QVMIEGPGHV
PMHKIKINMD KQLKECGEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF GCAMLCYVTP
KEHLGLPDRN DVKVGVITYK IAAHAADLAK GHPAAQLRDD AVSRARFDFR WQDQFNLGLD
PDTAQAFHDE TLPKDAHKVA HFCSMCGPKF CSMKITQDVR DYAAGLGDNE KAALYPAGSV
GMSISGVIED GMAQMSAKFR DMGEHLYLDA EKVKESNKAL S
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