| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3384 |
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| Symbol | |
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| ID | 4023896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3758038 |
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| End bp | 3758943 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963589 |
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| Product | putative lipoprotein |
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| Protein accession | YP_570509 |
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| Protein GI | 91977850 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.321347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0271451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGCAC AGCGGCTCGG ACTGCGAAAC AGGCTGGTCT CTCGCGGAAG CGATCGGTTT
TGGCGCAGCC TTCCCCTGAT GGCCAGTCTG GCCATGCTGG CGCTGCCGCT CGGCGGCTGC
GGCACCGGCG CGATCTGGGA CAAGTTCCTG GCGAAAGACG AGGACAAGTT CAACGACGAG
CCGGCGGACA AGCTCTATAA TGAGGGCTTG TACCTGATGA ACAAGGAAAA GGACCTGAAA
GCGGCGTCCA AGAAGTTCGA GGAAGTCGAC CGCCAGCATC CCTATTCCGA CTGGGCCCGC
AAATCGCTGC TGATGTCGGC CTATTCGTTC TATCAGGCCG GCGACTATGA CAGCTGCATC
GGCTCCGCCA CCCGCTACGT CACCCTGCAT CCCGGCAGCC CGGACGCCGC CTATGCGCAG
TATCTGATCG CGGCCTCGCA TTACGACCAG ATTCCGGACG TCTCCCGCGA CCAGGGCCGC
ACCGAGAAGG CGATCGCCGC TCTCGAGGAG GTCATCCGCA AATATCCGAC CTCCGAATAC
GCCAACCAGG CCAAACAGAA GCTGGAAGGC GCCCGCGACC AGCTCGCCGG CAAGGAGATG
GATGTCGGCC GCTATTACAT GCAAAAGCGC GACTACACCG CGGCGATCAA CCGCTTCAAG
ACCGTGGTCA CGCGCTATCA GACCACGCGT CACGTCGAGG AGGCGCTGGC GCGGCTGACC
GAGGCCTATA TGACGATCGG CATCGTCGGC GAGGCGCAGA CCGCCGCCGC GGTGCTTGGC
CACAACTTTC CTGACAGCCG CTGGTACAAA GACGCCTATA ATCTTGTAAA GTCCGGTGGA
CTCGAACCAA CCGAGAACAA GGGCTCCTGG ATCAGCAAGT CCTTCAAGAA GCTCGGTCTC
GGATAG
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| Protein sequence | MSAQRLGLRN RLVSRGSDRF WRSLPLMASL AMLALPLGGC GTGAIWDKFL AKDEDKFNDE
PADKLYNEGL YLMNKEKDLK AASKKFEEVD RQHPYSDWAR KSLLMSAYSF YQAGDYDSCI
GSATRYVTLH PGSPDAAYAQ YLIAASHYDQ IPDVSRDQGR TEKAIAALEE VIRKYPTSEY
ANQAKQKLEG ARDQLAGKEM DVGRYYMQKR DYTAAINRFK TVVTRYQTTR HVEEALARLT
EAYMTIGIVG EAQTAAAVLG HNFPDSRWYK DAYNLVKSGG LEPTENKGSW ISKSFKKLGL
G
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