| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3358 |
|---|
| Symbol | |
|---|
| ID | 4023869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3722819 |
|---|
| End bp | 3723319 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637963563 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570483 |
|---|
| Protein GI | 91977824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0103855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CGCCGAGCCG TTTCTCGGAG AAATCTGTGT TTCCGAAATG GATTCGCGGT
CCGCAGGATT TCATCGGCGG TCTCGCGCTG GTGGCGGTAG CAGCGTTCGC GCTGTGGGCC
GCGAGCGATC TTCAAGGCAT GCAAGGCTTC TCGTTCGGCG CCGGCACCGC GCCGCGGATG
TTCGCCGTGC TGCTGCTCGT CCTCGGTGTC GTGTTGACGG TCAGCGCTCT CCTTGTCGAT
GGCGAGCCGA TGGCGAAGTT TCAGTGGCGC GGACCGTTTT TCGTCGGCAT CGCAATTCTG
TCGTTCGCCG TCTCGATCCG GCCGCTGGGC CTCATCATTT CTGCTTTCGC GAGCTTCATG
ATCGCCGCGC TGGGCACGCC CGAGACGCGC TGGAAGGAGA CGATCATCGT CGGCGTCGCG
CTGACGATCG GTTGCAGCGT GTTGTTCCCC TTTGCATTGG GCCTGCCGAT GCCGCTGTAC
CCGTCGTTTC TGAACCGGTG A
|
|---|
| Protein sequence | MSDAPSRFSE KSVFPKWIRG PQDFIGGLAL VAVAAFALWA ASDLQGMQGF SFGAGTAPRM
FAVLLLVLGV VLTVSALLVD GEPMAKFQWR GPFFVGIAIL SFAVSIRPLG LIISAFASFM
IAALGTPETR WKETIIVGVA LTIGCSVLFP FALGLPMPLY PSFLNR
|
|---|
| |