| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3354 |
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| Symbol | thyA |
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| ID | 4023865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3717872 |
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| End bp | 3718666 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963559 |
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| Product | thymidylate synthase |
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| Protein accession | YP_570479 |
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| Protein GI | 91977820 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00819498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCAGT ACCACGACTT GCTTGAGCGA ATCCTCAGCG ACGGAACTGA AAAACACGAC
CGCACCGGGA CCGGTACGCT GTCGGTGTTC GGCCATCAGA TGCGGTTCAA TCTGGCCGCC
GGATTCCCGA TGCTGACAAC CAAACGGTTG CCGCTCAAGG CGATCGTCCA CGAACTGCTG
TGGTTTCTGC AGGGCGACAC CAACATCAAA TACCTGCGCG ACAACGGCGT GACGATCTGG
GACGAGTGGG CCGACGCCAA TGGCGATCTC GGCCCGGTCT ATGGCGCGCA ATGGCGCTCC
TGGCCGGCCG CGGACGGTCG CAGCATCGAC CAGATCGCCA ATATCGTCGA GATGATCAAG
CGCAACCCGG ACTCGCGGCG GCTGATCGTG ACGGCGTGGA ATCCGGCCGA TGTCGATCGG
ATGGCGCTGC CGCCGTGCCA TTGCCTGTTC CAGTTTTACG TCGCTGGCGG CAAGCTGTCT
TGCCAGTTGT ATCAACGTTC CGCCGACGTG TTTCTCGGCG TGCCGTTCAA CATCGCCTCC
TATGCGCTGC TGACGATGAT GATAGCGCAA GTCACCGGTC TGAAGCCGGG CGAATTCATC
CACACCCTCG GCGACGCGCA TTTGTATTCC AATCATCTGG AGCAGGCTCG CCTGCAACTG
ACCCGCGCGC CACGCGCGCT GCCGGAGATG GTGATCGATC CCGCCGTGAA GGACGTGTTC
GGCTTCCGTT ACGAGGACTT CACCCTGCAG GGCTACGATC CGCATCCGCA CATCAAGGCC
GAGGTCGCGG TGTGA
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| Protein sequence | MIQYHDLLER ILSDGTEKHD RTGTGTLSVF GHQMRFNLAA GFPMLTTKRL PLKAIVHELL
WFLQGDTNIK YLRDNGVTIW DEWADANGDL GPVYGAQWRS WPAADGRSID QIANIVEMIK
RNPDSRRLIV TAWNPADVDR MALPPCHCLF QFYVAGGKLS CQLYQRSADV FLGVPFNIAS
YALLTMMIAQ VTGLKPGEFI HTLGDAHLYS NHLEQARLQL TRAPRALPEM VIDPAVKDVF
GFRYEDFTLQ GYDPHPHIKA EVAV
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