| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3326 |
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| Symbol | |
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| ID | 4023836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3686447 |
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| End bp | 3687196 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963530 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570451 |
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| Protein GI | 91977792 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.999176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA TCGATCTCAA TCGTCGCTGC GCCATCGTCA CTGGCGGTGC GCAGGGGTTT
GGCCGGGCGA TCGCCGAGCG GTTCGCGGCG TCGGGTGCGC GGGTGGCGAT CTGGGACCAT
GACATCGCGC TGGCCGAGAC GACCGCCAAG GAAATCGGCG ACGATGTCGT CAGTGCCTTT
CAGGTCGACG TCACCGATCC CGCCGCGGTC GACGCCGCGC GCGACGCGAC AATGGCCGCG
TTCGGCAAGA TCGACATTCT GGTCAACAAT GCCGGCATCG CCGGGATCAA CAAGACGTTG
TGGGACACCG ACTACGAGGA ATGGCGCAAG GTGCTGCGCA TCAATCTCGA CGGTCCGTTC
ATCTGCTGCA AGTCGATCGT GCCGGCGATG ATCGCCCACA AATACGGACG CATCGTCAAT
ATCGCGTCGA TCGCCGGCAA GGAGGGCAAT CCCAACGCTG CGCACTATTC AGCCTCGAAG
GCCGGACTGA TCGCGCTGAC CAAATCGCTC GGCAAGGAGT TGGCCGCCTA CGACATCGCC
GTCAATGCGG TGACGCCGGC GGCGGCCCGG ACCGCAATCT TCGATCAGAT GACGCAACAG
CACATCGACT TCATGCTGTC GAAAATCCCG AAGGGTCGCT TCGTGCTGGT CGAGGAATTG
GCCGCGATGG TGGCGTGGCT CGCATCGGAG GATTGCGCGT TCTCGACCGG CGCGGTGTTC
GATATTTCGG GCGGCCGCGC GACCTATTGA
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| Protein sequence | MNSIDLNRRC AIVTGGAQGF GRAIAERFAA SGARVAIWDH DIALAETTAK EIGDDVVSAF
QVDVTDPAAV DAARDATMAA FGKIDILVNN AGIAGINKTL WDTDYEEWRK VLRINLDGPF
ICCKSIVPAM IAHKYGRIVN IASIAGKEGN PNAAHYSASK AGLIALTKSL GKELAAYDIA
VNAVTPAAAR TAIFDQMTQQ HIDFMLSKIP KGRFVLVEEL AAMVAWLASE DCAFSTGAVF
DISGGRATY
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