| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3293 |
|---|
| Symbol | |
|---|
| ID | 4023802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3645370 |
|---|
| End bp | 3645816 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570418 |
|---|
| Protein GI | 91977759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00908488 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACC AGCGCCCCAG TCTGATGATC GATCGCCGCG GCCGTCCGTT CCGGATGCGG
CTTGCGGTGT CCGCCGTTCT GATGGCCGGC GGGGCCGGTC TGTCGGGTTG CGCCGTGATC
GGCGATAGCG CGATATCGCA GGCGTTCGTC GATCCGGCGA AGTACGAGCT GTTCAACTGC
CCGCAGCTTG CGGTCGAGCG AAAGGGGCTG GACGCGCGCC TTGCCGAGTT GAACGGGCTG
ATGCGCAAGG CGGAGACCGG CGTCGCCGGT TCGGCCGTCG CCGAGATCGC CTATCGCAAC
GATTATATCA ACGTGAAGGC GCAATCCCGC CTCGCCGAGC AGACCTGGCG CGACAACAAA
TGCGTCGAGG AGCCGCCTGC GCCTGTGGCG CCTCCGTCCG GCGCGCGCGA CCCCGCACGG
TCCGAACGCG TCACGTCGAA ACGCTGA
|
|---|
| Protein sequence | MLNQRPSLMI DRRGRPFRMR LAVSAVLMAG GAGLSGCAVI GDSAISQAFV DPAKYELFNC
PQLAVERKGL DARLAELNGL MRKAETGVAG SAVAEIAYRN DYINVKAQSR LAEQTWRDNK
CVEEPPAPVA PPSGARDPAR SERVTSKR
|
|---|
| |