Gene RPD_3291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3291 
Symbol 
ID4023800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3643858 
End bp3644103 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content57% 
IMG OID637963494 
Producthypothetical protein 
Protein accessionYP_570416 
Protein GI91977757 
COG category[S] Function unknown 
COG ID[COG4391] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.641744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00862607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGACC ACGTAGTTCC ACATTTCCAG AACGATGCCG GCGTTCCAAT GATCGAGATC 
GGCTCGAAGG AATTTATGTG CGTGGGCGCC AATCCGCCGT TCGATCATCC GCATGTGTTT
CTCGATCTCG GCAACGACAA CGAGATCATC TGCCCGTATT GCTCGACGCT GTATCGCTAC
GCGCCCGACC TCAAATCCGG CGAAGCGCGT CCGCCGGAAT GCGTGCTGAA GGACAAGGTC
GCCTGA
 
Protein sequence
MSDHVVPHFQ NDAGVPMIEI GSKEFMCVGA NPPFDHPHVF LDLGNDNEII CPYCSTLYRY 
APDLKSGEAR PPECVLKDKV A