Gene RPD_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3256 
Symbol 
ID4023765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3611625 
End bp3612695 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID637963459 
Productcatalase 
Protein accessionYP_570381 
Protein GI91977722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0753] Catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0658316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGA GCCCCGTCCG TTACGCGCCC GATGTCGAGC AGGTGCAGCC GGACGAAACC 
GAGACGATCC GCGGATTGCG TCGAACCTTC AACCACATCC TCGAGACCAC CGCGAGTGAT
TACGGCCACG CGGTGCGCTC GGTTCACGCC AAGTCGCACG GCATTCTCGA AGGCAAGCTG
CTGATCGACG ATCATCTTCC GTCCGAACTG GCGCAGGGCA TGTTCGCCAA GCCTGGCGAG
CACAAGGTCT ACATGCGGCT GTCGACCAAT GCCGGCGACA TCCTGCCCGA CGCCATCTCG
CTGCCGCGCG GACTCGCGTT GAAGGTGCTC GATGTCGAAG GTCCGCGGCT GCCGGGCGCG
GAGGGCGCGA CGCAGGACTT CGTCATGGTC AACGGCCCGG TGTTCCTGGT CAAGACAGCC
AGCCAGTTTC ACGCCAGCCT GAAGCTGCTC GCCAGAACCA CCGACCGGAT GGAAGGCGCC
AAGGTCGCGT TGTCGGCGGC GCTACGCGGC GTCAACACCG CGTTGGAGGC GGTCGGCATC
GAGAGCTCGA CGATCCAGGC GCTCGGCGGC GCGCCGAACA TCGATCCGCT CGGCGAGACC
TACTACAGTG TGACGCCGTT CCGCTATGGC GACTACATCG CCAAATTCAG CCTCGCGCCG
GTCGCGACGG CGCTGCGCGC GCTGACCGGC AACGCGATCG ACGCAACTGA TCGGCCGAAC
GCGATCCGCG AAACGGTGCA GAAGGAAATG GGTGTGATCG ACGGCGTGTG GGAGTTGCGG
GTGCAGCTCT GCCGCGATCT CGACAAGCAG CCGATCGAGG ACGCCACCGC GCTATGGGAC
GAAGCGGACG CGCCGTTCCA GCGCGTCGGC CTGGTGATGA TTCCGCATCA GGACAGCTGG
GCGAAAGAGC GGGTTCAGGC GGTGGACGAG GCGATGCGGT TCAGCGTCTG GACCGGGCTT
GCGGCGCACC AGCCGCTCGG CAACATCAAC CGCGCCCGCC GCGACGCCTA CCGCCATTCC
GCGGATTTTC GTGCCCGCTT CAACCGCTGC CCGATCCACG AGCCGGCGTG A
 
Protein sequence
MPVSPVRYAP DVEQVQPDET ETIRGLRRTF NHILETTASD YGHAVRSVHA KSHGILEGKL 
LIDDHLPSEL AQGMFAKPGE HKVYMRLSTN AGDILPDAIS LPRGLALKVL DVEGPRLPGA
EGATQDFVMV NGPVFLVKTA SQFHASLKLL ARTTDRMEGA KVALSAALRG VNTALEAVGI
ESSTIQALGG APNIDPLGET YYSVTPFRYG DYIAKFSLAP VATALRALTG NAIDATDRPN
AIRETVQKEM GVIDGVWELR VQLCRDLDKQ PIEDATALWD EADAPFQRVG LVMIPHQDSW
AKERVQAVDE AMRFSVWTGL AAHQPLGNIN RARRDAYRHS ADFRARFNRC PIHEPA