Gene RPD_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3095 
Symbol 
ID4023599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3439876 
End bp3440298 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID637963295 
Producthypothetical protein 
Protein accessionYP_570222 
Protein GI91977563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0114483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC TCGGCCTCAA GGGCACGGCG GTGACGCCGA CGCCGGCGAT CGTCGTCAAC 
TTCCGGTCAT ATGCGTCGGG CTGCGCCGAG CCGACAACCT GCTCGGTCCA GGTCGCCGAC
ACCGTGCTGC GCCAGGGTCA GGGCATGCAC GGCTCGTTCA GCCGCGGCGA CACCTTGAAC
TTCATGGCGG CGGTCGGCCC CGAATTCAAA GCCGGCTTCG CCGATCCCCC TGCCCGTCAG
CAACGCCGAT GTCGGCTTCA CCGCGGCGCA CCTCCTCGGG TTGACGCCTG CTCAGCGATA
TTTCGACGCC GCGGGATTTC CGGGCCGCAC GCTCCGCCTC GCGGACGAGG AAGGCAAAAA
GAAAACGGCG GGGAAGTAAT CCCCGCCGCC TCACCGATCG ATCACTCACC AGCGTCATTT
TGA
 
Protein sequence
MSALGLKGTA VTPTPAIVVN FRSYASGCAE PTTCSVQVAD TVLRQGQGMH GSFSRGDTLN 
FMAAVGPEFK AGFADPPARQ QRRCRLHRGA PPRVDACSAI FRRRGISGPH APPRGRGRQK
ENGGEVIPAA SPIDHSPASF