| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3025 |
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| Symbol | |
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| ID | 4023528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3369205 |
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| End bp | 3370860 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963224 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_570152 |
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| Protein GI | 91977493 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.285589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.509442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGA CCGAGAGCGT TTTCGCGACC CACGAAGTCT TCAATCAGTC ACCGCCGTTC
GAGGACGTCG ACCTGTTCGG CGCCGATCGG CCATTGGTCG AAGCGGTGGC GCTGAACCAG
GGCAGTTACG CCCATGTCGA GCTCGAGGCA TTCGGACGCA ATTGGGGCTC GGCGCACATG
GCCGATCGCG GCAGGCTCGC CAACGAGCAT TCGCCGAGGT TGAAGAGCTT CGATGCCAAG
GGCCAGCGCC GCGATCAGGT GGAATTCCAT CCCGCCTATC ATGAGCTGAT GTCCGAGAGC
TTCCACGCCG GCATCCACAA CTCGACCTGG GATGGGCGCG GCCGGCCGGC CGGCGGCTCG
GCGGAAGTGG TGCGCGCCGC GAAGTTCTAT ATGGCCGCGC AGGTCGAGAC CGGACATCTG
TGCCCGGTGA CGATGACCCG CGCGTCGGTG GCGGCGATCG CGGCGCAGCC GGATCTGCTG
GCGCAAGTGA TGCCCGTGCT CGGCACCAAG CGCTACGACT CCGCTTTCGC GCCATGGTCC
GAGAAGCGCG GCATGAGCAT CGGCATGGGA ATGACCGAGA AGCAGGGCGG CACCGACGTT
CGCTCCAACG CGACCCGCGC GATCCGCGAC GGCGAGGCCT ATCGCATCAT CGGCCACAAA
TGGTTCATGT CGGCGCCGAT GTGCGACGCG TTCCTCGTGC TGGCGCAGGC CGACGAAGGG
CTGAGCTGTT TCTTCATGCC GCGTTTCAAG CCAGACGGCT CGGTCAACGA TATTCAGTTC
CAGCGGCTCA AGGACAAGCT CGGCAATCGG TCCAATGCGT CGTCCGAAGT CGAATTCGCC
GGCGCCTATG CGGTGCCGGT CGGCGAGCCG GGGCGTGGAA TCCGGACGAT CATCCAGATG
GTGCAGCTGA CGCGTCAGGA TTGCGCGATC GCCTCCGCGG GGCTGATGCG CTCCGGTCTT
GCGCACGCGC TGCATCACGC CCGCCATCGC AGCGTGTTCC AGAAGCATCT GATCGATCAC
TCGCTGATGC GGTCGGTGCT CGCCGACATG GCGCTGCAGG TCGAAGCCAC GGTCGCGCTG
GTGATGCGGC TGTGCCGGGC GTTCGACCAG GCGCCGCACG ATCATCTCGA GGCGGCTTAC
ATGCGGCTGA TGACGCCGGC GGTGAAGTAC TGGGTGTGCA AATCGGCGCC GCCGCTCGTG
TACGAGGCGA TGGAGTGCCT CGGCGGCAAC GGCTATGTCG AGGACGGCAT TCTGGCGCGG
CATTATCGCG AGGCGCCGGT GAATGCGATC TGGGAAGGCT CCGGCAATGT GATGTGCCTC
GACGTGCTGC GCGCGATGTC GCGCGAGAGC GACGCCGGCA CCGAGGTGCT GCAGGGCCTG
ATCCAGGACA CCGCGGGGCT TACCGGCGGT CCCGCCGCGG CGAGTCTCGT CGCACGGGCC
TTCTTGCAGG CAGACAACGA GCGCACCGCG CGACTCGCGG TCGAGACGCT GGCCAAGCTC
GCCGCCGCCG CTGCGCTGAA TGAAGTGCAT CCACCACATG CCGAGCTGTT CGCGCGGACG
CGACTCGCGC CCGAGCCGGC GACAATGTAC GGCGCGGCCG ATCTGTCTGC GGATCAGGCG
CGCAGCCTGC TCGCCCGCGC GCTGCCCGAG ATGTGA
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| Protein sequence | MVMTESVFAT HEVFNQSPPF EDVDLFGADR PLVEAVALNQ GSYAHVELEA FGRNWGSAHM
ADRGRLANEH SPRLKSFDAK GQRRDQVEFH PAYHELMSES FHAGIHNSTW DGRGRPAGGS
AEVVRAAKFY MAAQVETGHL CPVTMTRASV AAIAAQPDLL AQVMPVLGTK RYDSAFAPWS
EKRGMSIGMG MTEKQGGTDV RSNATRAIRD GEAYRIIGHK WFMSAPMCDA FLVLAQADEG
LSCFFMPRFK PDGSVNDIQF QRLKDKLGNR SNASSEVEFA GAYAVPVGEP GRGIRTIIQM
VQLTRQDCAI ASAGLMRSGL AHALHHARHR SVFQKHLIDH SLMRSVLADM ALQVEATVAL
VMRLCRAFDQ APHDHLEAAY MRLMTPAVKY WVCKSAPPLV YEAMECLGGN GYVEDGILAR
HYREAPVNAI WEGSGNVMCL DVLRAMSRES DAGTEVLQGL IQDTAGLTGG PAAASLVARA
FLQADNERTA RLAVETLAKL AAAAALNEVH PPHAELFART RLAPEPATMY GAADLSADQA
RSLLARALPE M
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