| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2948 |
|---|
| Symbol | |
|---|
| ID | 4023451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3284718 |
|---|
| End bp | 3286196 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963148 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_570076 |
|---|
| Protein GI | 91977417 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCC ATTTCCCGTT TGACAACAGC TACGCAGCGC TGCCGGACAA CTTCTTCGCG
CGGGTGGCTC CGACCCCGGT CGCCGCCCCG CGGCTGATCA AGCTCAACCG CCCGCTGGCC
GAGCGGCTCG GGCTCGATCC GGACTGGCTG GACAGCCCCG AAGGCGCGGA AATCCTCGCC
GGTGCCCGCC TCCCGGAGGG CGCAGCCTCG ATCGCGATGG CCTATGCGGG ACACCAGTTC
GGGCAATTCG TGCCGCAACT CGGCGATGGC CGCGCCATCC TGCTCGGCGA GGTGATCGAC
CGGGACGGCG TTCGCCGTGA CATCCAGCTC AAAGGCTCCG GCCGCACGCC GTTTTCGCGG
ATGGGCGACG GCCGCGCCGC GCTCGGCCCG GTGCTGCGGG AGTATATTGT CAGTGAGGCG
ATGGCCGCGC TCGGCATCCC GACCACCCGC TCGCTCGCCG CGGTCCTGAC AGGCGAACGC
GTGGTGCGCG ACCAAATTCA GCCCGGCGCG GTGCTGACGC GTGTCGCGTC GAGCCACATC
CGCGTCGGCA CATTCCAGTT CTTCGCCGCG CGCGGCGACC GCGAGGCGGT CCGGGCGCTG
GCCGACCACG TCATCGCCCG GCACTATCCG GAGGCGGCGC AGGCCGACGC GCCCTACCTG
GCGCTGCTTG AGGGCGTAAT TGCGCGGCAG GCCGATCTTA TCGCACGCTG GATGATGATC
GGCTTTATCC ACGGCGTGAT GAACACCGAC AATTGCTCGA TCGCCGGCGA AACCATCGAT
TACGGCCCCT GCGCCTTTAT GGACACGTTC GATCCCAAGA CGGTGTTCTC CTCGATCGAC
CACATGGGCC GCTACGCCTT TGGCAACCAG CCGCCGATCG CGCTGTGGAA CCTGACCCGG
CTCGCCGAGT GCCTGGTGCC GCTCCTGTCC GCCGACGAGG ACAAGGGCGT CGAGATCGCC
CAGACCGTGC TCGGCGGCTT CGCCGAACGC TTCAATGCCA CCTATCTGGC GGGGCTTGCG
GCCAAGCTCG GCCTTTTCAC CACCCAGGCG GACGATGCGC AGCTCTCGCA GGATTTTCTG
GCCGCGATGG CCAAAGGCCG GGCCGATTTT ACCCTCACCT TCCGCCGGCT GAGCGACGCC
GCCATCGATC CGACCGAACT CGGCACGGTC CGGGCGCTGT TCGACGATCC TGCCGCCTTC
GACGACTGGG CGCCGCGCTG GCGGCAACGG GTAACGGCCG AGCCGCAGGA CGGCGCAGCC
CGGCAGGCGG CGATGCGGGC GGTCAATCCG GCCTACATTC CGCGGAACCA CCGGGTCGAG
GCGGCGATCC GCGCCGCGGT CGATAAAGAC GACTTCGGGC CGTTCCACGA ACTGCTGACG
GTGCTCACCA ACCCCTTCCG GGAACAACCG GAATTCGACC GCTATGCGGA CCCGCCGCAG
CCCCATGAAC GCGTGCTCGA AACCTTCTGC GGAACTTGA
|
|---|
| Protein sequence | MTVHFPFDNS YAALPDNFFA RVAPTPVAAP RLIKLNRPLA ERLGLDPDWL DSPEGAEILA
GARLPEGAAS IAMAYAGHQF GQFVPQLGDG RAILLGEVID RDGVRRDIQL KGSGRTPFSR
MGDGRAALGP VLREYIVSEA MAALGIPTTR SLAAVLTGER VVRDQIQPGA VLTRVASSHI
RVGTFQFFAA RGDREAVRAL ADHVIARHYP EAAQADAPYL ALLEGVIARQ ADLIARWMMI
GFIHGVMNTD NCSIAGETID YGPCAFMDTF DPKTVFSSID HMGRYAFGNQ PPIALWNLTR
LAECLVPLLS ADEDKGVEIA QTVLGGFAER FNATYLAGLA AKLGLFTTQA DDAQLSQDFL
AAMAKGRADF TLTFRRLSDA AIDPTELGTV RALFDDPAAF DDWAPRWRQR VTAEPQDGAA
RQAAMRAVNP AYIPRNHRVE AAIRAAVDKD DFGPFHELLT VLTNPFREQP EFDRYADPPQ
PHERVLETFC GT
|
|---|
| |