Gene RPD_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2945 
Symbol 
ID4023448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3279717 
End bp3280169 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID637963145 
ProductDoxX 
Protein accessionYP_570073 
Protein GI91977414 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCT TCATAGCTCT CGGGCGCTTC CTTTTCTCGG TGCTGTTCAT CTTCTCCGGG 
GCGTCAAAGC TGCTCGACAT CGCCGCGACC ACCCAGATGA CGCAGAAGAT CGTCATTCCG
GAGATGCTGA CGACCTACAC CTCCCAGCTC GAAGGCCTGG CCGGGGGGAT GCCGTTCGCT
CAGATGCTGG CGATCGCGGC AGGCGCCACT GAGTTGTTGT GCGGCATCCT GATCGCATTG
AACTTCGGCG CGCGCTTCTT CGCGCTGATC CTGATCCTGT TCGTTGCGAT GACGATCTAT
TACTATCACG ATTTCTGGAA CCAGACCGGC GTCGACGCGC AGAACAATCT GATCCATGCG
CTGAAGAACC TGTCGCTGAT CGGCGGGCTG TTCATCATCG CCGGGATCGG CCGCGGAGCG
AGGCCTGCTG AGCCGGCCTA TAACGACGTG TAA
 
Protein sequence
MPAFIALGRF LFSVLFIFSG ASKLLDIAAT TQMTQKIVIP EMLTTYTSQL EGLAGGMPFA 
QMLAIAAGAT ELLCGILIAL NFGARFFALI LILFVAMTIY YYHDFWNQTG VDAQNNLIHA
LKNLSLIGGL FIIAGIGRGA RPAEPAYNDV