Gene RPD_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2888 
Symbol 
ID4023386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3216032 
End bp3216226 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content57% 
IMG OID637963086 
Producthypothetical protein 
Protein accessionYP_570017 
Protein GI91977358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.452348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.167276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACT CAATTCATTC AGCGGATCGG GCGACCCATC TGAAGATTGT CGTGGTGGCT 
CTGGTTGCCG GCATCGGTGT CGCCGCGTTC GGTATCAGCG CCCGGGTGAG CGCCGACTAC
AGCCAGACCG CTCATGTCGT GAAGGCAACA AAGCAGATCA CCGTCACGAG TTCCGAAAGC
TCGATCGTGA GATAA
 
Protein sequence
MNHSIHSADR ATHLKIVVVA LVAGIGVAAF GISARVSADY SQTAHVVKAT KQITVTSSES 
SIVR