| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2714 |
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| Symbol | |
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| ID | 4023212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3029324 |
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| End bp | 3030622 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962913 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_569844 |
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| Protein GI | 91977185 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.840196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGCG CGCCCGTTGA AAGCCGCTCC GGAACACACT TCATGGCTCT GTTCGCACCA
TTATTGCCCG TCCGATCGCG CCGCCTGCGG GGCTGGCGCG TGCTGCTGGC CGGCGTGCTG
GCGATGGCGA TCGGCTCGGG CGCGGTGTAC GCCGCGAACC AGAGCGTGCA GGGCGCCAAG
AAGGAAGAAG TTGCGGGCGG TTACGAGACC GAAGCGCCGA CCGCGATCCT GATCGACGCA
GAGAGCGGCA GCGTGCTGTT CGAGAAGAAT GCCGACGAGC TGCGCCCGCC GTCGAGCATG
CTGAAGCTGA TGACGGTCGA GCTGGTGTTT CACCTGCTGA CCAAAGGCGA GATCAAGCTG
ACCGACGATT ACCGGATCAG CGAGAACGCC TGGCGCCGTG GCGGCGCGCC GGCCGGCAGT
TCGACGATGT TCGCCGAAAT CCACAGCCGC GTGTCGATCG ACGACCTGCT GCGCGGCGCG
ATCATCCAGA GCGGCAATGA TTCCTGCATC GCGCTCGCCG AGGGCATCGC CGGCAGCGAA
CAGGCGTTCG CCGAGCGGAT GACCAAGCGC GCCCGGGAGA TCGGGCTGGC GCAATCCACC
TTCGCCAATT CCAACGGTCT GCCCGACCCC GGCAACAAGA TGAGCGTGCG CGAACTCGGC
CGGCTCGCGC GCCACCTCAT CCAGACCTAT CCGGACTACT ACAAACTGTT CGGCGAGAAG
GAATTCACCT GGAACAAGAT CCGGCAGACC AACCGCAATC CGCTGCTCAA CACGATGCCC
GGCGCCGATG GCCTGAAGAC CGGCTACACA AAGGACGGCG GCTACGGGAT GGTCGGCTCC
GCGGTGCAGA ACGGGACGCG GCTGATCGTG GTCGTCAATG GCGTCGAGGA CGCTGACGAC
CGCGCCAGCG AGGCCAAGAA GCTGCTGGAA TGGGGTTTTC GCAACTTCGA ATCGCGCCCG
CTGTTCGCGG CCCAGGCCAC TGTCGGCTAT GCGCGCGTTT TCGGCGGCGA GAAGCGCTAT
GTCGGCCTGA CGCCGGTCGA GCCGGTGCGG GTGATGGTGC GCAAGAACGG CAGCGACAAG
CTGCTGGCGC GGATCGTCTA TACCGGGCCG ATCGCGGCGC CGGTCGAGGC CGGCCATCGC
ATCGGTGTGG TGCGGGTGTG GCGCGGCCCC AACCTCGCGG TCGAGGTGCC GCTGCAGGCT
GCCGAGGTCA ATCCGGTCGG CTCGACGATG CGGCGGGCGC TGGACGGCGC CAGCGAGTTG
ATGATCGGGG TGTTCCGAGC GGGAATTGCA AAGCTCTGA
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| Protein sequence | MVRAPVESRS GTHFMALFAP LLPVRSRRLR GWRVLLAGVL AMAIGSGAVY AANQSVQGAK
KEEVAGGYET EAPTAILIDA ESGSVLFEKN ADELRPPSSM LKLMTVELVF HLLTKGEIKL
TDDYRISENA WRRGGAPAGS STMFAEIHSR VSIDDLLRGA IIQSGNDSCI ALAEGIAGSE
QAFAERMTKR AREIGLAQST FANSNGLPDP GNKMSVRELG RLARHLIQTY PDYYKLFGEK
EFTWNKIRQT NRNPLLNTMP GADGLKTGYT KDGGYGMVGS AVQNGTRLIV VVNGVEDADD
RASEAKKLLE WGFRNFESRP LFAAQATVGY ARVFGGEKRY VGLTPVEPVR VMVRKNGSDK
LLARIVYTGP IAAPVEAGHR IGVVRVWRGP NLAVEVPLQA AEVNPVGSTM RRALDGASEL
MIGVFRAGIA KL
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