Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2672 |
Symbol | nrdR |
ID | 4023169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2985919 |
End bp | 2986401 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962870 |
Product | transcriptional regulator NrdR |
Protein accession | YP_569802 |
Protein GI | 91977143 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0812854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGCC CGAACTGCAA CAGCCTCGAC ACCCAGGTGA AGGATAGCCG GCCCACCGAG GATTCCTCGG TGATCCGGCG GCGGCGCGTC TGCATCGCCT GCAACTTCCG CTTCACGACG TTCGAGCGGG TGCAGTTGCG CGAGCTGACG GTGATCAAGC GCAACGGCCG AAGGGTGCCG TTCGACCGCG ACAAGCTGGT GCGTTCGGTG CAGATCAGTT TGCGCAAGCG GCCGGTCGAA CCGGAGCGGG TCGAGCAGCT GGTCTCGGCG ATCGTGCGTG AACTCGAAAG CAGCGGCGAG GCGGATATCT CGTCGGAGAC CATCGGCGAG ATCGTGATGG ACCATTTGCG CAAGCTCGAC GACGTCGCTT ACGTCCGCTT CGCCTCGGTC TATCGCAATT TCCGCGAGGC GAAGGACTTC GAAGCCGTGC TAGGCGAATT GTCCGGCGAG GAAGAGGCCC GTCCGACGCT GGTTCGCAAA TGA
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Protein sequence | MRCPNCNSLD TQVKDSRPTE DSSVIRRRRV CIACNFRFTT FERVQLRELT VIKRNGRRVP FDRDKLVRSV QISLRKRPVE PERVEQLVSA IVRELESSGE ADISSETIGE IVMDHLRKLD DVAYVRFASV YRNFREAKDF EAVLGELSGE EEARPTLVRK
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