Gene RPD_2672 details

Gene Information

• Locus tag: RPD_2672
• Symbol: nrdR
• ID: 4023169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB5
• Kingdom: Bacteria
• Replicon accession: NC_007958
• Strand: +
• Start bp: 2985919
• End bp: 2986401
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637962870
• Product: transcriptional regulator NrdR
• Protein accession: YP_569802
• Protein GI: 91977143
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0812854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTGCC CGAACTGCAA CAGCCTCGAC ACCCAGGTGA AGGATAGCCG GCCCACCGAG 
GATTCCTCGG TGATCCGGCG GCGGCGCGTC TGCATCGCCT GCAACTTCCG CTTCACGACG 
TTCGAGCGGG TGCAGTTGCG CGAGCTGACG GTGATCAAGC GCAACGGCCG AAGGGTGCCG 
TTCGACCGCG ACAAGCTGGT GCGTTCGGTG CAGATCAGTT TGCGCAAGCG GCCGGTCGAA 
CCGGAGCGGG TCGAGCAGCT GGTCTCGGCG ATCGTGCGTG AACTCGAAAG CAGCGGCGAG 
GCGGATATCT CGTCGGAGAC CATCGGCGAG ATCGTGATGG ACCATTTGCG CAAGCTCGAC 
GACGTCGCTT ACGTCCGCTT CGCCTCGGTC TATCGCAATT TCCGCGAGGC GAAGGACTTC 
GAAGCCGTGC TAGGCGAATT GTCCGGCGAG GAAGAGGCCC GTCCGACGCT GGTTCGCAAA 
TGA 

 

Protein sequence

MRCPNCNSLD TQVKDSRPTE DSSVIRRRRV CIACNFRFTT FERVQLRELT VIKRNGRRVP 
FDRDKLVRSV QISLRKRPVE PERVEQLVSA IVRELESSGE ADISSETIGE IVMDHLRKLD 
DVAYVRFASV YRNFREAKDF EAVLGELSGE EEARPTLVRK