Gene RPD_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2660 
Symbol 
ID4023157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2976901 
End bp2977953 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID637962858 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_569790 
Protein GI91977131 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.397348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA AATTCGGCCG TCCCATCGAA ATGCGCGACC CCGCCCCCCG GCCGTCCGCC 
CCTGCCCTCG ATCTGACTGT GCGCCCGCGG CGCAATCGCA AGACCGAATG GGCCCGCCGG
CTGGTTCGCG AGAATTGCGT CACCACGGAT GACCTGATCT GGCCGCTGTT CGTCGTCGAA
GGCAGTAACC AGCGCGTCCA GATCCCCTCG ATGCCCGGCG TCGAGCGGCT CAGCATCGAC
CAGGTGGTGC GTGCCGCAGA GCGCGCGGTC CGATTGGAGA TCCCTTGCCT CGCGCTGTTT
CCCTACACCG ACCCGACGCT GCGTGACGAG CACGGCACGG AAGCGACCAA CGCCGAGAAT
CTGGTGTGCC GCACCGTGCG CGCCATCAAG AACGAATTCC CCGAACTCGG CGTGCTGTGC
GACGTCGCGC TCGACCCGTT CACGAGCCAC GGCCATGACG GGCTGATCCA GGACGGCTGC
ATCCTCAACG ACGAGACCGT CGCGGTGCTG GTCCGGCAGT CGCTGGTGCA GGCCGAGGCC
GGCTGCGACG TGATCGCGCC GTCGGACATG ATGGACGGCC GCATCGGTGC GATCCGCGCA
GGCCTCGACG CCGCCGGCTT CCAGGACGTG CAGATCATGG CCTATGCGGC GAAATACGCC
TCCGCGTTCT ACGGCCCGTT CCGCGATGCG ATCGGCTCGG CCAAGGCGCT GACCGGCGAC
AAGCGCACCT ATCAGATGGA CCCGGCCAAT ACCGACGAGG CGATCCGCGA AGTCGAACTC
GATCTCGCCG AGGGCGCCGA CATGGTGATG GTCAAGCCCG GCATGCCTTA TCTCGACATC
GTGCGTCGCG TGAAGGAGAC CTTCGCGGTG CCGACCTTCG CCTATCAGGT GTCGGGCGAG
TACGCGATGA TTGCTGCGGC GGCGAACAAT GGCTGGCTCG ACGGCGAGCG CGCGATGATG
GAAAGCCTGC TCGGCTTCAA GCGCGCCGGC GCCGATGGCG TGCTCACCTA CTTCGCCCCG
CAAGCGGCCG AGAAGCTGAA GAAGCAGGGC TGA
 
Protein sequence
MAIKFGRPIE MRDPAPRPSA PALDLTVRPR RNRKTEWARR LVRENCVTTD DLIWPLFVVE 
GSNQRVQIPS MPGVERLSID QVVRAAERAV RLEIPCLALF PYTDPTLRDE HGTEATNAEN
LVCRTVRAIK NEFPELGVLC DVALDPFTSH GHDGLIQDGC ILNDETVAVL VRQSLVQAEA
GCDVIAPSDM MDGRIGAIRA GLDAAGFQDV QIMAYAAKYA SAFYGPFRDA IGSAKALTGD
KRTYQMDPAN TDEAIREVEL DLAEGADMVM VKPGMPYLDI VRRVKETFAV PTFAYQVSGE
YAMIAAAANN GWLDGERAMM ESLLGFKRAG ADGVLTYFAP QAAEKLKKQG