| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2644 |
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| Symbol | |
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| ID | 4023141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2961250 |
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| End bp | 2961927 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962842 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_569774 |
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| Protein GI | 91977115 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0136839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00783391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCGA CGCGCGGTCC TCTCGCCGCG GTATCTCGTC CAATCGCCGA ACCCGATCGT
GATTGCCCCG ACTGTCCGAG GCTCGCGGCA TTCCGCCGCG AGCAGCGGCT GCGTGAGCCC
CTCTGGCACA ATGCGCCGGT GCCCTCGTTC GGCGATGACG ACGCAACGCT ACTGATCGTC
GGGCTCGCGC CGGGCTTGCA GGGCGCCAAC CGCACCGGCC GGCCATTCAC CGGCGATTAC
GCCGGCGACC TGCTCTACGC GACGTTGATC GAATATGGCT TCGCCAAGGG TAACTACGAG
GCCCGGCCGG ACGACGGGCT GCGGCTGGTC CGCTGCCGGA TCAGCAATGC GGTGCGCTGC
GTGCCGCCGC AGAACAAGCC CCTCCCTATC GAGATCAACA CCTGCCGGCG GTTTCTCGCG
ACGACGATCG AGACCATGCC GAAGCTGCGC GCGTTGGTGA TGCTCGGGCG CATCGCGCAC
GATTCGACGT TGAAAGCCGT CGGCCTTCGA GCATCGCAGG CGCCGTTCGG GCACGGCGCG
GTCCACCAGG CCGGCGCGCT GCGGCTGTAC GACAGCTATC ACTGCTCACG CTACAACACG
AACACCGGCG TGCTCACCCC GAAGATGTTC CACGCGGTGT TCGCCCGCGT TCGCGCCGAT
CTGGACCAAC CGAACTAG
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| Protein sequence | MTATRGPLAA VSRPIAEPDR DCPDCPRLAA FRREQRLREP LWHNAPVPSF GDDDATLLIV
GLAPGLQGAN RTGRPFTGDY AGDLLYATLI EYGFAKGNYE ARPDDGLRLV RCRISNAVRC
VPPQNKPLPI EINTCRRFLA TTIETMPKLR ALVMLGRIAH DSTLKAVGLR ASQAPFGHGA
VHQAGALRLY DSYHCSRYNT NTGVLTPKMF HAVFARVRAD LDQPN
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