| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2553 |
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| Symbol | |
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| ID | 4023047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2858300 |
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| End bp | 2860042 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962749 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_569684 |
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| Protein GI | 91977025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.182713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CCTCTCCAAC GCCCCGCTTC GGTGGCCCCC GCGAGCCCAG AAATGCCATC
GACCCCGGCC GCGGGCTGGT GGCGGTGCTG GATTTTGCGT CCGTCAGCCA TCTGCGCGCA
GTGGCGTTCT TGGTACTGGT CGGGCTGCTG TTTTTTCTGC CGGGTTTCTT CAACATCCCG
CCGATCGACC GCGACGAGGC CCGCTTCGCC CAGGCCACCA AGCAGATGGT CGAGAGCGAT
GATTTCATCG ATATCCGGTT CCAGGACGAG GTCCGCTACA AGAAGCCGGT CGGGATCTAC
TGGTTGCAAG CCGCGGTCGT CGAAACCGCG TCGCGGCTCG GCCTGCCGCG CGCCGAAGTC
CGGATCTGGC TCTATCGCGT GCCGTCGCTG GCCGGTGCGA TCGGCGCGGT GCTGATGACC
TATTGGGCGG CGCTCGCCTT TGTCGGGCGG CGCGGGGCGG TGATCGCCGG TCTTCTGTTG
TGCAGCTCGA TCTTGCTGGG TGTCGAGGCG CGACTGGCCA AGACCGACGC GTTCTTGCTG
TTCACGGTGA CCGCCGCGAT GGGCGCGATG GCGCATGTCT ATCTCGCCTG GCAGCGCGGC
GACGACCGCT ACCACTCCTG GATCACGCCG GCCATTTTCT GGACCGCGGT CGCCGCGGGC
ATTCTTCTCA AGGGCCCGCT GATCCTGATG TTCATCGCGC TGACGGTGGC CGCGCTGGCG
TTTGTCGATC GCTCGGCGGT GTGGCTGTGG CGTCTGAAGC CGCTGGCCGG CGTGCTGTGG
ATGCTGGTGC TGGTGCTGCC GTGGTTCATC GCGATCTTCC TGCGCGCCGG CGACACCTTC
TTCGCCGACT CGGTCGGCGG CGACATGTTG AGCAAGATCG CCAGTCCCAA GGAATCCCAC
GGCGCGCCGC CGGGCCTGTA TTTCCTGCTG TTCTGGGTGA CGTTCTGGCC GGGCGCGCCG
TTGGCCGCGA TGGCTGCGCC TGCGGTGTGG CGGGCACGGC GCGAGCCGGG CGCGCAATAT
TTGCTGGCCT GGGTGATCCC GTCCTGGATC GTGTTCGAGC TGGTGATCAC CAAGCTGCCG
CACTATGTGC TGCCGCTGTA TCCGGCGATC GCGATCATGA CCGCTGGCGC GATCGAGCAC
AGCGTGCTGT CGCGCTCCTG GCTGACCCGC GGCGCGGCGT GGTGGTTCGC GATTCCAGTC
GTCGTGCTGT CGCTCGCGAT CATCGGCGCC ATCATCCTGA CCCGGCAGCC GGCGTTCCTG
GCGTGGCCGT TCGTCGCGGC CTCGCTGATT TTCGGGCTGT TCGCGTGGCG GCTGTTCGAC
CAGAACCGCG CCGAAGCCTC GCTGCTCAAC GCCTCGCTGG CGTCGCTGTT TCTGATGGTC
GCCGCGCTCG GCGTCGTGGT GCCGACGCTG CGGCCGGTGT TCCCGAGCGT CGAGATCGCG
CAGGCGCTGC GCAAGGTGGT GTGCGTCGGG CCTAAGGCCG CGGCCGTGGG CTTCCACGAG
CCGAGCCTGG TGTTCATGAC CGGCACCGAT ACGTTGCTGA CCGACGGCTC CGGTGCCGCC
GACTTCCTGC TCGGCGGAAG CTGCCGCTTC GCGCTGGTGG AAGCTCGCAG CGAGCGCGCA
TTCGCGGCGC GGGCCGAGGC GATCGGGTTG CACTACAACG TGGCGACCCG GATCGACGGC
TACAATTTCT CGCAGGGCAA GCCGGTGTCG ATCGCGATCT TCCGTTCCGA AGGCACGCAG
TAA
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| Protein sequence | MTETSPTPRF GGPREPRNAI DPGRGLVAVL DFASVSHLRA VAFLVLVGLL FFLPGFFNIP
PIDRDEARFA QATKQMVESD DFIDIRFQDE VRYKKPVGIY WLQAAVVETA SRLGLPRAEV
RIWLYRVPSL AGAIGAVLMT YWAALAFVGR RGAVIAGLLL CSSILLGVEA RLAKTDAFLL
FTVTAAMGAM AHVYLAWQRG DDRYHSWITP AIFWTAVAAG ILLKGPLILM FIALTVAALA
FVDRSAVWLW RLKPLAGVLW MLVLVLPWFI AIFLRAGDTF FADSVGGDML SKIASPKESH
GAPPGLYFLL FWVTFWPGAP LAAMAAPAVW RARREPGAQY LLAWVIPSWI VFELVITKLP
HYVLPLYPAI AIMTAGAIEH SVLSRSWLTR GAAWWFAIPV VVLSLAIIGA IILTRQPAFL
AWPFVAASLI FGLFAWRLFD QNRAEASLLN ASLASLFLMV AALGVVVPTL RPVFPSVEIA
QALRKVVCVG PKAAAVGFHE PSLVFMTGTD TLLTDGSGAA DFLLGGSCRF ALVEARSERA
FAARAEAIGL HYNVATRIDG YNFSQGKPVS IAIFRSEGTQ
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