Gene RPD_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2538 
Symbol 
ID4023031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2840899 
End bp2841135 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content58% 
IMG OID637962733 
Producthypothetical protein 
Protein accessionYP_569669 
Protein GI91977010 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA GCACCCGCAT TGCCCTCGGC GTGTCCGCCG CCGCACTCTC GCTCAACCTC 
GCGCTCGCGC CCGCTGCCTT CGGCATGGAC AAGGCGGACA CCATGAAGAA GGACACGATG
TCCAAGGACA GCATGAAGAA GGATACGATG GCGAAGGACG GCATGAAAAA GGACGACGGC
ATGCACAAGG ACAGCATGAC CAAAGACGGC ATGTCGAAAG ACAGCATGAA GAAGTAA
 
Protein sequence
MTFSTRIALG VSAAALSLNL ALAPAAFGMD KADTMKKDTM SKDSMKKDTM AKDGMKKDDG 
MHKDSMTKDG MSKDSMKK