Gene RPD_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2496 
SymbolglpX 
ID4022987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2790468 
End bp2791472 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID637962689 
Productfructose 1,6-bisphosphatase II 
Protein accessionYP_569627 
Protein GI91976968 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1494] Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 
TIGRFAM ID[TIGR00330] fructose-1,6-bisphosphatase, class II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.427198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0990959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CCATTTCCGT TCCGCCGCAA TTGTTGCTGG AGCGCATCCT GACGCTCGAG 
ATCGTGCGCG TGACGGAGCG TGCTGCGGTG TCGGCGGCGA GGCTGCGCGG CCACGGCGAC
GAAAAGGGCG CCGACCAGGC CGCGGTGGAC GCGATGCGGC GCGAGCTCAA CAAGATGCCG
ATCGAAGGCA CCGTGGTGAT CGGCGAGGGC GAGCGCGACG AGGCGCCGAT GCTGTTCATC
GGCGAGAAGG TCGGCGCCGG CATCGACGCC GGGCCGAAGG TCGACATCGC GGTCGATCCG
CTCGAAGGCA CCACGCTGTG CGCCAAGAAC ATGCCGGGTT CGATCGCCAC CATGGCGATG
GCCGAAGGCG GCACGCTGCT GCACGCGCCC GACGTCTACA TGCAGAAGAT CGCGATCGGC
CCGGGCTACG ACAAGGGCGT GATCGACATC GACGCGCCGC CGGAGGAGAA CATCCGACGT
CTCGCGCAAG CCAAGGACGT GCCGATCCAC GGCATCACCG CGCTGGTGCT CGACCGTCCG
CGCCATGCCG AACTCATTTC CAAGATCCGC GCCACCGGCG CCGGCGTTCA GCTGATCACC
GACGGCGACG TCGCGGGCGT GATCCATTGC GCCGATCCGG AGAACACCGG CGTCGACATC
TACATCGGCA CCGGCGGCGC GCCGGAAGGC GTGCTGGCCG CGGCGGCGCT GCGCTGCATC
GGCGGCCAGA TGCAGTGCCG GCTGCTGCTC GACACCTATT CGAAGCGCAA TCGCGCCGAG
TCGATGGGGA TCGAGGATCC GAACTTCGTC TACCAGATCG AGGACATGGT GAAGGGCGAC
TGCCTGTTCG CCGCCACCGG CGTCACCGAC GGTTCGCTGC TGTCCGGCGT CAAGTTCCGC
AAGAACGTGA TCCAGACGGA GACCGTGGTG ATGCGCTCGG TCACCGGCAC TGTCCGCTAC
ATCAAGGCCG ATCATCGCCA GTTCGAGAAG TTCCACCTCG ACTGA
 
Protein sequence
MSTTISVPPQ LLLERILTLE IVRVTERAAV SAARLRGHGD EKGADQAAVD AMRRELNKMP 
IEGTVVIGEG ERDEAPMLFI GEKVGAGIDA GPKVDIAVDP LEGTTLCAKN MPGSIATMAM
AEGGTLLHAP DVYMQKIAIG PGYDKGVIDI DAPPEENIRR LAQAKDVPIH GITALVLDRP
RHAELISKIR ATGAGVQLIT DGDVAGVIHC ADPENTGVDI YIGTGGAPEG VLAAAALRCI
GGQMQCRLLL DTYSKRNRAE SMGIEDPNFV YQIEDMVKGD CLFAATGVTD GSLLSGVKFR
KNVIQTETVV MRSVTGTVRY IKADHRQFEK FHLD