| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2495 |
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| Symbol | |
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| ID | 4022986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2789084 |
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| End bp | 2790403 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637962688 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_569626 |
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| Protein GI | 91976967 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.35731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.100562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC TCAGAGTGGG TATTGCGGGT CTCGGCACCG TCGGCGCCGA AGTGGTCCGT
GTCATCGAAC GGCAGGAGCG GACGCTGGCG GCGCGCTGCG GCCGGCCCGT GCGTGTCGTC
GCCGTCACCG CGCGATCGAA GGCCAAGAAG CGTGGCCTCG ACCTGCGCGG CATCAAATGG
GCGAAGAACC CGCTGGCGAT CGCCACCGAT CCCGAGGTCG ACTGTTTCGT CGAGTTGATC
GGCGGCGTCG ACGAACCCGC GGGGCCGGCG ATCGAGGCGG CGCTCGCCGC CGGCAAATCG
GTCGTCACCG CCAACAAGGC GCTGATCGCC AAGCACGGCC TCAAGCTCGC GGCGCTCGCG
GAGAAGCACG GCGTCGCTTT GAATTATGAA GCCGCGGTCG GCGCTGCGAT CCCGGTGATC
AAGACGCTGC GCGAAGGCCT CGCCGGCACC GATATCGACC GCATCTACGG TATCCTCAAC
GGCACCTGCA ATTACATCCT GACGCGGATG GAGCAGGAAG GGCTGTCATT CGACGAGTGT
CTCAAGGACG CCCAGCGGCT CGGCTATGCC GAGGCCAATC CGGCGTTCGA CGTCGATGGC
CACGACACCG CGCAGAAATT GTCGATTCTC GCCAGCCTCG CCTTCGGCAC CAAGGTCGCG
CAGAGCGCGG TCTATGTCGA AGGCATCACC TCGATCACGC CGGAGGATCT GCGCGCCGCC
GCCGATCTCG GCTATCGCCT CAAGCTGCTC GGCGTCGCGG TGCGCACGCC CCAGGGCATC
GAGCAGCGCG TTCATCCCAC CATGGTGCCG CGGTCCTCGT CGATCGCCCA GGTGATGGGC
GTCACCAATG CTGTGACCAT CGACGGCGAC GGCATTCCGC CGATCACGCT GGTCGGCGCC
GGCGCCGGCG CCGCGGCGAC GGCCTCGGCC GTGGTCGCCG ACATCGCCGA CGTCGCGCGC
GGCATCCGCG CCGAGCCGTT CGGCCGGCCG GTGGCGAAGC TCGCCGCGAT CAGCAAGGCG
CCGATGCAAC GCCACGAGGG CGGTTATTAT CTGCGCCTGA TGGCGCGCGA CCACGCCGGA
ACCGCGGCGA CCATCGCGAC GCGGCTCGCC GAGCAGGACA TCTCGATCGA ATCGATCGTG
CAGCGCCAGC CCGACCGCGC TGCCGACGGC AACGGCAAGC CGGTCAAATC CGCGCCGGTG
CCGGTGATCC TGATCACCTA TGCGACCAGC GAGGACGCGG TGCGCCGCGC GCTGCAGGCG
GTACAGCGCG ACAAGGTGAT CAGCGGCCGG CCGCAGGTCA TCCGGATCGA AAAGAACTAG
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| Protein sequence | MDALRVGIAG LGTVGAEVVR VIERQERTLA ARCGRPVRVV AVTARSKAKK RGLDLRGIKW
AKNPLAIATD PEVDCFVELI GGVDEPAGPA IEAALAAGKS VVTANKALIA KHGLKLAALA
EKHGVALNYE AAVGAAIPVI KTLREGLAGT DIDRIYGILN GTCNYILTRM EQEGLSFDEC
LKDAQRLGYA EANPAFDVDG HDTAQKLSIL ASLAFGTKVA QSAVYVEGIT SITPEDLRAA
ADLGYRLKLL GVAVRTPQGI EQRVHPTMVP RSSSIAQVMG VTNAVTIDGD GIPPITLVGA
GAGAAATASA VVADIADVAR GIRAEPFGRP VAKLAAISKA PMQRHEGGYY LRLMARDHAG
TAATIATRLA EQDISIESIV QRQPDRAADG NGKPVKSAPV PVILITYATS EDAVRRALQA
VQRDKVISGR PQVIRIEKN
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