Gene RPD_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2455 
Symbol 
ID4022946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2742131 
End bp2743303 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID637962648 
Productaminotransferase, class V 
Protein accessionYP_569586 
Protein GI91976927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC GGGTCTATCT TGATTGGAAC GCGACAACGC CGTTGCGGGC GGAAGCGCGG 
GCGGCGATCG CGGCGGCGCT GGAGCTGGTC GGTAATCCAT CTTCGATCCA TGCCGAGGGC
CGGGCGGCGC GCGGGATGGT CGAACAGGCC CGCGCGGCGG TGGCCGCGGC GATCGGGGCC
GAGGCGCGGA GCGTCGTGTT TACATCGGGA GGCACCGAAG CCAACACGCT GGCGCTCATG
CCCGGACTCC GGATCGGTTC CCAACCGGCT GAACGGCTTG TCATTTCGGC CATCGAGCAC
GCCTCGGTGC TGGCTGGCGG GCGGTTTGCG TCGGAGCATA TCGATACCGT TCGCGTGACG
CGAGAAGGCG TCGTCGATCT GGATCATCTG CGCAGCCTGC TGGCGGGCCG GCCACCGGCG
CTGGTGTCGG TGATGCTCGC CAATAATGAG ACCGGCGCCC TGCAGCCGGT GACCGATATC
GGCGGCATCG TCCATGCGGC CGGCGGCGTC CTGCACGTCG ACGCAGTTCA GGCATTCGGG
AAAATTCCGT TCAATTTCAA TGATCTGGGC ACCGATCTTG TATCGCTTTC TGCGCACAAG
ATCGGTGGGC CTAAGGGCGT CGGTGCGCTG GTTCTCGGGG CCAATCTGGC CGGCCTCGCG
CCGTTGCTGC GCGGTGGCGG TCAGGAGCTG GGCCGGCGGG CCGGGACGGA GAATGTCGCC
GGGATCGCGG GCTTTGGCGC GGCGGTTGCG GCGGCGATTC CCGCCATGGC TGCGGACATG
AGCCGGATCG AAAAACTGCG AAATCGGCTC GAAACAGGCC TGAGGCAAAC CCAAGGCAGC
GAAGGCGGAA TTGTGATCGC CGAATCCGCG CCGCGGCTGG CGAACACGAC GCTGTTCGCG
GTGCCGGGAT TGCGCGCCGA GACCGCGGTG ATCGGATTCG ACCTCGCCGG AATCGCGGTG
TCGTCCGGGT CGGCGTGCTC GTCGGGCAAG GTCCGGTCAT CGCATGTGCT CGAGGCGATG
GGGTTCGGTC CGGAACTTGC ACAGTCGGCG ATACGGATCA GTCTCGGCTG GTCGAGTAGC
GAAACCGACA TTGATCGCTG CCTTGAGGCT TGGAGAAAGC TTGCGGGCAA CCTAACTAAG
AGGGATCATG AAACAGAGCT TGAACGGTTC TAA
 
Protein sequence
MADRVYLDWN ATTPLRAEAR AAIAAALELV GNPSSIHAEG RAARGMVEQA RAAVAAAIGA 
EARSVVFTSG GTEANTLALM PGLRIGSQPA ERLVISAIEH ASVLAGGRFA SEHIDTVRVT
REGVVDLDHL RSLLAGRPPA LVSVMLANNE TGALQPVTDI GGIVHAAGGV LHVDAVQAFG
KIPFNFNDLG TDLVSLSAHK IGGPKGVGAL VLGANLAGLA PLLRGGGQEL GRRAGTENVA
GIAGFGAAVA AAIPAMAADM SRIEKLRNRL ETGLRQTQGS EGGIVIAESA PRLANTTLFA
VPGLRAETAV IGFDLAGIAV SSGSACSSGK VRSSHVLEAM GFGPELAQSA IRISLGWSSS
ETDIDRCLEA WRKLAGNLTK RDHETELERF