| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2441 |
|---|
| Symbol | |
|---|
| ID | 4022932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2719311 |
|---|
| End bp | 2720648 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962634 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_569572 |
|---|
| Protein GI | 91976913 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.990408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.705886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGA TGACCGATAT CGGTGCTTCC GGAGCGTTGC ATCGCACCAG ATCCAAGCCC
TGGTACAAGG TGCTCTATGT CCAGGTTCTG ATCGCGATCG TGCTCGGCGT GCTGCTCGGC
TGGGTGTCGC CGCATCTGGC GACCAACCCG TGGATCAAGG CGCTCGGCGA TGGCTTCGTC
AAGCTGATCA AGATGGTGAT CGCGCCGATC ATCTTCTGCA CCGTCGTCTC CGGCATCGCG
CATATCCAGG ACGCGCGAAA GGTCGGGCGG GTCGGCGTCA AGGCGCTGCT GTATTTCGAA
GTGGTGTCGT CCTTCGCGCT GATCCTCGGC CTCATCGTCG GCAATCTGGT GCCGGTCGGG
CACGGGCTTG CGGCCAAGCC GGACGCCGGC GCGGTGGCGA AATACGTCGA CCAGGCAAGC
CACATGAGCT CGGTCGATTT CTTCCTGAAC ATCATTCCGG AGAGTGTCGT CGGCGCGTTC
GCGAAAGGCG ACATCCTGCA GGTGCTGCTG TTCGCGATCC TGTTCGGCTT CGCACTGATG
GCGCTCGGCG AGCGCGGCCA CCGACTGCGC GACGTGATCG ACGACACCGC CCACGCGGTG
TTCGGCGTGA TCGCGATCGT GATGAAGGCC GCCCCGGTCG GTGCATTCGG CGCGATGGCC
TTCACCATCG GCAAATACGG CCCCGCCGCG CTGGGCAATC TGATCGGCCT GGTCGCGTTG
TTCTACGCGA CCGCGGCGCT GTTCGTGTTC GTGGTGCTGG GGCTGATCGC GAAATTCGTC
GGCTTCAACA TTTTCAGGTT CGTCGGCTAC ATCAAGGACG AGCTGCTGAT CGTGCTCGGC
ACCTCGTCGT CCGAAAGCGC GCTGCCGCAA CTGATGGAAA AGCTCGAACG GCTCGGCTGC
TCGAAATCGG TGGTCGGTCT GGTGGTGCCG ACCGGCTATT CGTTCAACCT CGACGGCACC
AACATCTACA TGACGCTGGC GACCTTGTTC ATCGCCCAGG CGCTCGGGAT CGAGCTCACC
TTCACCGAAC AGGTCACCAT CCTGCTGGTG GCGATGCTGA CTTCGAAGGG TGCGAGCGGC
GTCACCGGGG CGGGCTTCGT CACCCTCGCC GGAACGCTCG CGGCGGTGAA CCCGGCGCTG
GTGCCGGGGA TGGCAATCGT GTTTTCGATC GACAAGTTCA TGAGCGAGGT GCGCGCGCTC
ACCAACATCA CCGGCAACGG CGTCGCCACG GTGTTCGTGT CGTGGTGGGA GGGTGAACTC
GACCACGACC GGCTGCAGGC CAATCTCAAC CGGACGATCG ATCCGTCCGA CGTCGAGACC
GCAATCACCA CCGGCTGA
|
|---|
| Protein sequence | MSTMTDIGAS GALHRTRSKP WYKVLYVQVL IAIVLGVLLG WVSPHLATNP WIKALGDGFV
KLIKMVIAPI IFCTVVSGIA HIQDARKVGR VGVKALLYFE VVSSFALILG LIVGNLVPVG
HGLAAKPDAG AVAKYVDQAS HMSSVDFFLN IIPESVVGAF AKGDILQVLL FAILFGFALM
ALGERGHRLR DVIDDTAHAV FGVIAIVMKA APVGAFGAMA FTIGKYGPAA LGNLIGLVAL
FYATAALFVF VVLGLIAKFV GFNIFRFVGY IKDELLIVLG TSSSESALPQ LMEKLERLGC
SKSVVGLVVP TGYSFNLDGT NIYMTLATLF IAQALGIELT FTEQVTILLV AMLTSKGASG
VTGAGFVTLA GTLAAVNPAL VPGMAIVFSI DKFMSEVRAL TNITGNGVAT VFVSWWEGEL
DHDRLQANLN RTIDPSDVET AITTG
|
|---|
| |