Gene RPD_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2417 
Symbol 
ID4022908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2695829 
End bp2696500 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID637962610 
Producthypothetical protein 
Protein accessionYP_569548 
Protein GI91976889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.12503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATC TCAAAACGTT GACCGCCGTG GCTGCGCTGG CGATAGCGCT GCCGCTGGCC 
ACCACCAGCT TAAGCTTCGC ACAAGGCAGC ATCGGTGGCG GTGGCGGTGG AGCCGCTGGT
GGGGGCGGCG GTGGTGGTGG CGGTGGCGGT GGTGGCGGTG GCAGCATCGG TGGCGGTAGC
ATCGGCCGTG GCGGTGGCGG TGGCCCTGCA ATGGGCGGCG GCGGCGGTGG TGGCATCATC
AGCGGCGGTA GCATCGGCCG GGGCGGCGGT GGCGCCGTGA TCGGCGGCGG CGGTCCGCGC
ATGGGTGGTG GCGGCATGAT CGGAGCCGGC CCCCGTAATC CGGGATATGC TGGCGGCGGC
TACCGCGGCC CGGGCTATGC GAGCGGCGGT TACCATCGCG GTCACCGTGG CGGATGGCAT
GGTGGCGGTC GGCAATGGCG CGGCGGCGGC TACTGGCCGG GCGCGTATGC GGGAGCAGTG
GTTGGCGGAG CGCTGGCGTC GCAATACTAC TATAATGACC CCTATTACTA TGGCAACTAC
GACGAGCCGA TGATTGCAGT CGTGCCGGGC GGCGGTCGCG ATGATGCTTA CTGCGCACGG
CGCTTCAAGT CGTATGACCC GGGTTCAGGA ACGTATCTTG GCTATGACGG CCGCCGTCAT
GCCTGCCCGT AA
 
Protein sequence
MLNLKTLTAV AALAIALPLA TTSLSFAQGS IGGGGGGAAG GGGGGGGGGG GGGGSIGGGS 
IGRGGGGGPA MGGGGGGGII SGGSIGRGGG GAVIGGGGPR MGGGGMIGAG PRNPGYAGGG
YRGPGYASGG YHRGHRGGWH GGGRQWRGGG YWPGAYAGAV VGGALASQYY YNDPYYYGNY
DEPMIAVVPG GGRDDAYCAR RFKSYDPGSG TYLGYDGRRH ACP