Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2417 |
Symbol | |
ID | 4022908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2695829 |
End bp | 2696500 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962610 |
Product | hypothetical protein |
Protein accession | YP_569548 |
Protein GI | 91976889 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.12503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0235404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAATC TCAAAACGTT GACCGCCGTG GCTGCGCTGG CGATAGCGCT GCCGCTGGCC ACCACCAGCT TAAGCTTCGC ACAAGGCAGC ATCGGTGGCG GTGGCGGTGG AGCCGCTGGT GGGGGCGGCG GTGGTGGTGG CGGTGGCGGT GGTGGCGGTG GCAGCATCGG TGGCGGTAGC ATCGGCCGTG GCGGTGGCGG TGGCCCTGCA ATGGGCGGCG GCGGCGGTGG TGGCATCATC AGCGGCGGTA GCATCGGCCG GGGCGGCGGT GGCGCCGTGA TCGGCGGCGG CGGTCCGCGC ATGGGTGGTG GCGGCATGAT CGGAGCCGGC CCCCGTAATC CGGGATATGC TGGCGGCGGC TACCGCGGCC CGGGCTATGC GAGCGGCGGT TACCATCGCG GTCACCGTGG CGGATGGCAT GGTGGCGGTC GGCAATGGCG CGGCGGCGGC TACTGGCCGG GCGCGTATGC GGGAGCAGTG GTTGGCGGAG CGCTGGCGTC GCAATACTAC TATAATGACC CCTATTACTA TGGCAACTAC GACGAGCCGA TGATTGCAGT CGTGCCGGGC GGCGGTCGCG ATGATGCTTA CTGCGCACGG CGCTTCAAGT CGTATGACCC GGGTTCAGGA ACGTATCTTG GCTATGACGG CCGCCGTCAT GCCTGCCCGT AA
|
Protein sequence | MLNLKTLTAV AALAIALPLA TTSLSFAQGS IGGGGGGAAG GGGGGGGGGG GGGGSIGGGS IGRGGGGGPA MGGGGGGGII SGGSIGRGGG GAVIGGGGPR MGGGGMIGAG PRNPGYAGGG YRGPGYASGG YHRGHRGGWH GGGRQWRGGG YWPGAYAGAV VGGALASQYY YNDPYYYGNY DEPMIAVVPG GGRDDAYCAR RFKSYDPGSG TYLGYDGRRH ACP
|
| |