Gene RPD_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2284 
Symbol 
ID4022769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2547486 
End bp2548076 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content58% 
IMG OID637962476 
Producthypothetical protein 
Protein accessionYP_569417 
Protein GI91976758 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.33945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAATG ATTATCGGCT GAAGGTGGAC ATTGCCTCGA TCGTTGAGGA CTTCGCCGAC 
CTGAAGATCA AAATCCGCTT TGGCGAAGGC GCACCGAATA TCGAGGCACG CGACGACATC
AAGTTCACTG ATATCGGGCC GATCATTCGG ACGGTCGACG GCGTACGCGG AGAAGGTGAC
CTGGTGCAGC GGCGATGGAG TTGGCCGGGC CAGAACAAAC GGCCGGTCTA TAATTTCCGA
TCGGAGGGCC GGGAGTTCAT CTCGAACCGC TGCCTGATTG TCACCGACGG CTTCTATGAA
TTCACCGATC CCGTCGAGAA GGGGAAGAAG CGCGAGGACA AGTGGCTTTT CAAGAAAAGC
GATGAGCGTC TGATGTGCAT CGCGGGCATC TGGCGCGAGA CCAAGGATGT CGGCGAAGCC
TTTACCATGC TGACCATGGA GCCCGGGCCC GATATCGCGC CATATCATGA TCGGCAGATT
GTCGTTCTCG AGCGCGAGGC TTGGGCTGAC TGGCCCGATC CGTCCGTTTC AGCGCGCGAC
CTTATCAAGC CCTTACCGTC AGGATCGCTC AAGGTCGAGC AGGTAGGCTA A
 
Protein sequence
MCNDYRLKVD IASIVEDFAD LKIKIRFGEG APNIEARDDI KFTDIGPIIR TVDGVRGEGD 
LVQRRWSWPG QNKRPVYNFR SEGREFISNR CLIVTDGFYE FTDPVEKGKK REDKWLFKKS
DERLMCIAGI WRETKDVGEA FTMLTMEPGP DIAPYHDRQI VVLEREAWAD WPDPSVSARD
LIKPLPSGSL KVEQVG