Gene RPD_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2279 
Symbol 
ID4022764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2543646 
End bp2544050 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID637962471 
Producthypothetical protein 
Protein accessionYP_569412 
Protein GI91976753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG CCGTTCAGAA GATCACCCTG TCGTCCTCGC GCGACATTCC CTTCAACAAG 
CTCATTCTCT CCCAGACCAA CGTCCGGACC AGAAAAGACG GCATCTCAAT CGAGGACCTG
GCGGCCTCGA TCGCCCGTCT TGGGCTGATC CAGAGTATTC ACGTGCGCCC CGTTCTCGAC
GCCGACGGGG CCGAGACCGG CATGTTCGAC GTTCCCGCCG GGGGCCGACT GTCAATGTTC
ACCCAAACGG GACCCCGTTT TTTCACCCAA ACGCAGGCCG GGTTCACCGC GGCCATGTGC
ATCTTCGATC CAATGTCGAT TGCTGCGGCC CCGAAGTTGA CCGGCTTCAA ATCCGGGTGG
TTATCGGTCG TCGTCTTGGG CATAGCATCC TCCATTCAAT CGTGA
 
Protein sequence
MATAVQKITL SSSRDIPFNK LILSQTNVRT RKDGISIEDL AASIARLGLI QSIHVRPVLD 
ADGAETGMFD VPAGGRLSMF TQTGPRFFTQ TQAGFTAAMC IFDPMSIAAA PKLTGFKSGW
LSVVVLGIAS SIQS